FFCP PHASE1:Hg19::chr3:52321827..52321859,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=132158 | |EntrezGene=132158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24247 | |HGNC=24247 | ||
|TSSclassifier=strong | |||
|UniProt=C9JA32,Q8IVS8 | |UniProt=C9JA32,Q8IVS8 | ||
|association_with_transcript=0bp_to_ENST00000305690,ENST00000354773,ENST00000471180,ENST00000473032,ENST00000486393,NM_001144951,NM_145262,NR_026699,NR_026700,NR_026701,NR_026702,uc003ddm.2,uc003ddn.2,uc003ddo.2,uc003ddq.2_5end | |association_with_transcript=0bp_to_ENST00000305690,ENST00000354773,ENST00000471180,ENST00000473032,ENST00000486393,NM_001144951,NM_145262,NR_026699,NR_026700,NR_026701,NR_026702,uc003ddm.2,uc003ddn.2,uc003ddo.2,uc003ddq.2_5end | ||
|cluster_id=chr3:52321827..52321859,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_GLYCTK_5end | |description=CAGE_peak_1_at_GLYCTK_5end | ||
|id=chr3:52321827..52321859,+ | |id=chr3:52321827..52321859,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.61e-33!140;CL:0000988!1.55e-32!182;CL:0000037!5.43e-32!172;CL:0000566!5.43e-32!172;CL:0002032!1.85e-29!165;CL:0000837!1.85e-29!165;CL:0002087!1.71e-27!119;CL:0002031!5.18e-27!124;CL:0002057!4.09e-22!42;CL:0000766!7.91e-21!76;CL:0000860!3.42e-19!45;CL:0000763!4.57e-18!112;CL:0000049!4.57e-18!112;CL:0000557!2.65e-17!71;CL:0000839!1.68e-15!70;CL:0002194!2.06e-15!63;CL:0000576!2.06e-15!63;CL:0000040!2.06e-15!63;CL:0000559!2.06e-15!63;CL:0002009!2.76e-15!65;CL:0000838!1.32e-11!52;CL:0000542!9.41e-11!53;CL:0000051!9.41e-11!53;CL:0000791!5.28e-10!18;CL:0000789!5.28e-10!18;CL:0002420!5.28e-10!18;CL:0002419!5.28e-10!18;CL:0000790!5.28e-10!18;CL:0000134!1.79e-09!358;CL:0002320!2.46e-09!365;CL:0000084!2.79e-09!25;CL:0000827!2.79e-09!25;CL:0000625!1.03e-07!11;CL:0000048!6.24e-07!430;CL:0000219!7.62e-07!390 | |ontology_enrichment_celltype=CL:0000738!4.61e-33!140;CL:0000988!1.55e-32!182;CL:0000037!5.43e-32!172;CL:0000566!5.43e-32!172;CL:0002032!1.85e-29!165;CL:0000837!1.85e-29!165;CL:0002087!1.71e-27!119;CL:0002031!5.18e-27!124;CL:0002057!4.09e-22!42;CL:0000766!7.91e-21!76;CL:0000860!3.42e-19!45;CL:0000763!4.57e-18!112;CL:0000049!4.57e-18!112;CL:0000557!2.65e-17!71;CL:0000839!1.68e-15!70;CL:0002194!2.06e-15!63;CL:0000576!2.06e-15!63;CL:0000040!2.06e-15!63;CL:0000559!2.06e-15!63;CL:0002009!2.76e-15!65;CL:0000838!1.32e-11!52;CL:0000542!9.41e-11!53;CL:0000051!9.41e-11!53;CL:0000791!5.28e-10!18;CL:0000789!5.28e-10!18;CL:0002420!5.28e-10!18;CL:0002419!5.28e-10!18;CL:0000790!5.28e-10!18;CL:0000134!1.79e-09!358;CL:0002320!2.46e-09!365;CL:0000084!2.79e-09!25;CL:0000827!2.79e-09!25;CL:0000625!1.03e-07!11;CL:0000048!6.24e-07!430;CL:0000219!7.62e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.91e-16;33!CL:0002057;1.91e-16;33!CL:0000473;6.17e-14;39!CL:0000234;6.17e-14;39!CL:0000576;6.60e-13;48!CL:0000766;6.42e-12;69!CL:0000791;5.27e-10;18!CL:0000789;5.27e-10;18!CL:0002419;5.27e-10;18!CL:0002087;1.41e-09;104!CL:0000084;3.40e-09;25!CL:0000738;3.09e-08;136!CL:0000625;1.06e-07;11!CL:0000542;1.34e-07;53!CL:0000763;1.46e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.04e-35,136;CL:0000988,1.49e-34,177;CL:0000037,2.98e-34,168;CL:0002032,1.17e-31,161;CL:0000837,1.17e-31,161;CL:0002087,4.18e-30,115;CL:0002031,1.60e-29,120;CL:0000766,8.90e-24,72;CL:0000860,4.09e-22,42;CL:0002057,4.09e-22,42;CL:0000473,4.19e-22,48;CL:0000234,4.19e-22,48;CL:0000763,4.08e-20,108;CL:0000049,4.08e-20,108;CL:0000557,5.09e-20,67;CL:0002194,3.89e-18,59;CL:0000576,3.89e-18,59;CL:0000040,3.89e-18,59;CL:0000559,3.89e-18,59;CL:0000839,4.85e-18,66;CL:0002009,6.20e-18,61;CL:0000838,1.32e-11,52;CL:0000542,9.41e-11,53;CL:0000051,9.41e-11,53;CL:0000791,5.28e-10,18;CL:0000789,5.28e-10,18;CL:0002420,5.28e-10,18;CL:0002419,5.28e-10,18;CL:0000790,5.28e-10,18;CL:0000134,7.36e-10,354;CL:0002320,1.03e-09,361;CL:0000084,2.79e-09,25;CL:0000827,2.79e-09,25;CL:0000625,1.03e-07,11;CL:0000048,3.25e-07,427;CL:0000219,3.79e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.27e-16;42!CL:0000790;5.27e-10;18!CL:0000051;1.34e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.05e-21!112;UBERON:0002390!2.78e-21!102;UBERON:0003061!2.78e-21!102;UBERON:0002371!5.65e-16!80;UBERON:0003081!2.64e-15!216;UBERON:0001474!3.56e-14!86;UBERON:0002405!2.40e-13!115;UBERON:0004765!1.06e-10!101;UBERON:0001434!1.06e-10!101;UBERON:0002384!1.43e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-23,98;UBERON:0003061,1.02e-23,98;UBERON:0002193,1.03e-23,108;UBERON:0002405,2.20e-18,93;UBERON:0002371,2.46e-18,76;UBERON:0003081,6.17e-17,203;UBERON:0001474,3.04e-16,82;UBERON:0004765,4.18e-14,90;UBERON:0001434,2.11e-11,100;UBERON:0002384,6.29e-09,371 | |||
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| ||
|short_description=p1@GLYCTK | |short_description=p1@GLYCTK | ||
}} | }} |
Latest revision as of 23:18, 18 September 2015
Short description: | p1@GLYCTK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLYCTK_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000305690, ENST00000354773, ENST00000471180, ENST00000473032, ENST00000486393, NM_001144951, NM_145262, NR_026699, NR_026700, NR_026701, NR_026702, uc003ddm.2, uc003ddn.2, uc003ddo.2, uc003ddq.2_5end |
EntrezGene: | GLYCTK |
HGNC: | 24247 |
UniProt: | C9JA32Q8IVS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-23 | 98 |
blood island | 1.02e-23 | 98 |
hemolymphoid system | 1.03e-23 | 108 |
immune system | 2.20e-18 | 93 |
bone marrow | 2.46e-18 | 76 |
lateral plate mesoderm | 6.17e-17 | 203 |
bone element | 3.04e-16 | 82 |
skeletal element | 4.18e-14 | 90 |
skeletal system | 2.11e-11 | 100 |
connective tissue | 6.29e-09 | 371 |