FFCP PHASE1:Hg19::chr1:114302086..114302174,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10745 | |EntrezGene=10745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8939 | |HGNC=8939 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMS5 | |UniProt=Q9UMS5 | ||
|association_with_transcript=0bp_to_ENST00000357783,ENST00000369604,ENST00000493212,uc001edn.2,uc001edp.2_5end | |association_with_transcript=0bp_to_ENST00000357783,ENST00000369604,ENST00000493212,uc001edn.2,uc001edp.2_5end | ||
|cluster_id=chr1:114302086..114302174,- | |||
|description=CAGE_peak_1_at_PHTF1_5end | |description=CAGE_peak_1_at_PHTF1_5end | ||
|id=chr1:114302086..114302174,- | |id=chr1:114302086..114302174,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.71e-12!86;UBERON:0001017!1.84e-12!82;UBERON:0000955!2.52e-12!69;UBERON:0006238!2.52e-12!69;UBERON:0002616!4.89e-11!59;UBERON:0000073!1.48e-10!94;UBERON:0001016!1.48e-10!94;UBERON:0000956!5.04e-10!25;UBERON:0000203!5.04e-10!25;UBERON:0002619!1.17e-09!22;UBERON:0001049!2.51e-09!57;UBERON:0005068!2.51e-09!57;UBERON:0006241!2.51e-09!57;UBERON:0007135!2.51e-09!57;UBERON:0001950!6.69e-09!20;UBERON:0003080!8.34e-08!42;UBERON:0002346!1.37e-07!90;UBERON:0003075!1.87e-07!86;UBERON:0007284!1.87e-07!86;UBERON:0002780!2.01e-07!41;UBERON:0001890!2.01e-07!41;UBERON:0006240!2.01e-07!41;UBERON:0001869!2.27e-07!32;UBERON:0002020!5.53e-07!34;UBERON:0003528!5.53e-07!34;UBERON:0003056!9.06e-07!61 | |ontology_enrichment_uberon=UBERON:0005743!1.71e-12!86;UBERON:0001017!1.84e-12!82;UBERON:0000955!2.52e-12!69;UBERON:0006238!2.52e-12!69;UBERON:0002616!4.89e-11!59;UBERON:0000073!1.48e-10!94;UBERON:0001016!1.48e-10!94;UBERON:0000956!5.04e-10!25;UBERON:0000203!5.04e-10!25;UBERON:0002619!1.17e-09!22;UBERON:0001049!2.51e-09!57;UBERON:0005068!2.51e-09!57;UBERON:0006241!2.51e-09!57;UBERON:0007135!2.51e-09!57;UBERON:0001950!6.69e-09!20;UBERON:0003080!8.34e-08!42;UBERON:0002346!1.37e-07!90;UBERON:0003075!1.87e-07!86;UBERON:0007284!1.87e-07!86;UBERON:0002780!2.01e-07!41;UBERON:0001890!2.01e-07!41;UBERON:0006240!2.01e-07!41;UBERON:0001869!2.27e-07!32;UBERON:0002020!5.53e-07!34;UBERON:0003528!5.53e-07!34;UBERON:0003056!9.06e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;5.12e-10;25!UBERON:0000203;5.12e-10;25!UBERON:0002619;1.13e-09;22!UBERON:0001950;6.04e-09;20!UBERON:0001869;6.65e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.46e-12,81;UBERON:0000955,6.32e-12,68;UBERON:0006238,6.32e-12,68;UBERON:0001016,4.06e-10,89;UBERON:0000956,5.04e-10,25;UBERON:0000203,5.04e-10,25;UBERON:0002619,1.17e-09,22;UBERON:0001049,6.00e-09,56;UBERON:0005068,6.00e-09,56;UBERON:0006241,6.00e-09,56;UBERON:0007135,6.00e-09,56;UBERON:0000073,6.39e-09,53;UBERON:0002616,6.39e-09,53;UBERON:0001950,6.69e-09,20;UBERON:0002780,2.01e-07,41;UBERON:0001890,2.01e-07,41;UBERON:0003080,2.01e-07,41;UBERON:0006240,2.01e-07,41;UBERON:0001869,2.27e-07,32;UBERON:0003528,5.53e-07,34;UBERON:0002020,5.53e-07,34;UBERON:0002346,7.60e-07,86 | |||
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| ||
|short_description=p1@PHTF1 | |short_description=p1@PHTF1 | ||
}} | }} |
Latest revision as of 06:08, 16 September 2015
Short description: | p1@PHTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHTF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357783, ENST00000369604, ENST00000493212, uc001edn.2, uc001edp.2_5end |
EntrezGene: | PHTF1 |
HGNC: | 8939 |
UniProt: | Q9UMS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.46e-12 | 81 |
brain | 6.32e-12 | 68 |
future brain | 6.32e-12 | 68 |
nervous system | 4.06e-10 | 89 |
cerebral cortex | 5.04e-10 | 25 |
pallium | 5.04e-10 | 25 |
regional part of cerebral cortex | 1.17e-09 | 22 |
neural tube | 6.00e-09 | 56 |
neural rod | 6.00e-09 | 56 |
future spinal cord | 6.00e-09 | 56 |
neural keel | 6.00e-09 | 56 |
regional part of nervous system | 6.39e-09 | 53 |
regional part of brain | 6.39e-09 | 53 |
neocortex | 6.69e-09 | 20 |
regional part of forebrain | 2.01e-07 | 41 |
forebrain | 2.01e-07 | 41 |
anterior neural tube | 2.01e-07 | 41 |
future forebrain | 2.01e-07 | 41 |
cerebral hemisphere | 2.27e-07 | 32 |
brain grey matter | 5.53e-07 | 34 |
gray matter | 5.53e-07 | 34 |
neurectoderm | 7.60e-07 | 86 |