FFCP PHASE1:Hg19::chr1:110993754..110993788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84432 | |EntrezGene=84432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18454 | |HGNC=18454 | ||
|TSSclassifier=strong | |||
|UniProt=P58294 | |UniProt=P58294 | ||
|association_with_transcript=0bp_to_NM_032414,uc001dzs.2_5end | |association_with_transcript=0bp_to_NM_032414,uc001dzs.2_5end | ||
|cluster_id=chr1:110993754..110993788,+ | |||
|coexpression_cluster_id=C337 | |||
|description=CAGE_peak_1_at_PROK1_5end | |description=CAGE_peak_1_at_PROK1_5end | ||
|id=chr1:110993754..110993788,+ | |id=chr1:110993754..110993788,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.40e-16!15;CL:0002615!1.71e-09!3;CL:0002541!7.36e-09!3;CL:0000325!1.33e-08!39;CL:0002617!9.05e-07!2 | |ontology_enrichment_celltype=CL:0000136!1.40e-16!15;CL:0002615!1.71e-09!3;CL:0002541!7.36e-09!3;CL:0000325!1.33e-08!39;CL:0002617!9.05e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000136;9.69e-29;13!CL:0002615;1.73e-19;3!CL:0002617;2.34e-13;2!CL:0002195;5.04e-13;2!CL:0002571;5.04e-13;2!CL:0002541;2.06e-09;3!CL:0002616;2.83e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.09e-25,15;CL:0002615,1.68e-19,3;CL:0002617,2.34e-13,2;CL:0002195,4.89e-13,2;CL:0002571,4.89e-13,2;CL:0002541,1.98e-09,3;CL:0002616,2.83e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.05e-13;2!UBERON:0003124;8.81e-08;1!UBERON:0000358;2.83e-07;1!UBERON:0010227;2.83e-07;1!UBERON:0005754;2.83e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;6.06e-13;2!DOID:178;4.21e-07;1!DOID:326;4.21e-07;1!DOID:3978;4.21e-07;1!DOID:3394;4.21e-07;1!DOID:5844;4.21e-07;1!DOID:1287;6.75e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.20e-13,2;DOID:178,3.62e-07,1;DOID:326,3.62e-07,1;DOID:3978,3.62e-07,1;DOID:3394,3.62e-07,1;DOID:5844,3.62e-07,1;DOID:1287,6.26e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.89e-28!115;UBERON:0000476!7.36e-09!3;UBERON:0000920!7.36e-09!3;UBERON:0006947!8.40e-09!3;UBERON:0004054!8.40e-09!3;UBERON:0003135!1.53e-08!11;UBERON:0002240!2.20e-08!3;UBERON:0001049!5.40e-07!57;UBERON:0005068!5.40e-07!57;UBERON:0006241!5.40e-07!57;UBERON:0007135!5.40e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.29e-10;6!UBERON:0002358;5.29e-10;6!UBERON:0003684;5.29e-10;6!UBERON:0001178;5.29e-10;6!UBERON:0003124;2.06e-09;3!UBERON:0000920;2.06e-09;3!UBERON:0003135;3.09e-09;11!UBERON:0006947;7.01e-09;3!UBERON:0004054;7.01e-09;3!UBERON:0000473;1.20e-07;8!UBERON:0001882;1.25e-07;1!UBERON:0005403;1.25e-07;1!UBERON:0000996;2.01e-07;1!UBERON:0002079;2.83e-07;1!UBERON:0000998;2.83e-07;1!UBERON:0001301;2.83e-07;1!UBERON:0006868;2.83e-07;1!UBERON:0005904;7.27e-07;4!UBERON:0004457;8.24e-07;9!UBERON:0000042;8.24e-07;9!UBERON:0003101;8.95e-07;22!UBERON:0000079;8.95e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.21e-10,6;UBERON:0002358,5.21e-10,6;UBERON:0003684,5.21e-10,6;UBERON:0001178,5.21e-10,6;UBERON:0000920,1.98e-09,3;UBERON:0003135,3.37e-09,11;UBERON:0006947,8.23e-09,3;UBERON:0004054,8.23e-09,3;UBERON:0003124,9.57e-09,7;UBERON:0007023,1.06e-07,114;UBERON:0000473,1.23e-07,8;UBERON:0001882,1.25e-07,1;UBERON:0005403,1.25e-07,1;UBERON:0000996,1.83e-07,1;UBERON:0002079,2.35e-07,1;UBERON:0000998,3.01e-07,1;UBERON:0006868,3.01e-07,1;UBERON:0001301,3.40e-07,1;UBERON:0003133,3.71e-07,48;UBERON:0005156,4.91e-07,59;UBERON:0000990,4.91e-07,59;UBERON:0005904,8.19e-07,4;UBERON:0003101,9.36e-07,22;UBERON:0000079,9.36e-07,22 | |||
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|phase1_expression=5.81370813665781,5.1384125733836,3.80576891059122,11.0080628188443,27.7115878544918,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1104262862187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929551542956147,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14551586047925,14.650783345569,0,0,2.84313558994037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19427136107939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07907042179997,0,0,0,0,21.6920788617705,0.183195186803725,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,1.22206028986725,0,0,0,0.134802265961354,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.193978032976839,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,1.79711100449092,5.15071257763885,1.56220020209311,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.121499113316049,0,0,0.209818352539992,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63205341010842,0.5013797880454,1.22538230705385,0.327872630709804,0,0,0,0,0.573409195690071,0,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90019468686452,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,199.156949468833,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,0.496211178389294,0,0,0,0,0,0,21.2885688390333,0,0,0,0.197318320688547,0,0,1.56986185701028,0,0,0,0,0,0,0,13.948971044175,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.594092800654172,0.8453114551668,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,120.412351468782,45.2859379963942,0,0,0,0,0,0.124149428591716,0,0.190941474834495,0,0,0,0,0.573777643141411,0,0,0,0,0,2.34640942403454,0.366724332548599,0,3.99454064511308,0,0 | ||
|short_description=p1@PROK1 | |short_description=p1@PROK1 | ||
}} | }} |
Latest revision as of 00:53, 16 September 2015
Short description: | p1@PROK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PROK1_5end |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | 0bp_to_NM_032414, uc001dzs.2_5end |
EntrezGene: | PROK1 |
HGNC: | 18454 |
UniProt: | P58294 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.09e-25 | 15 |
adipocyte of omentum tissue | 1.68e-19 | 3 |
adipocyte of breast | 2.34e-13 | 2 |
hepatic stem cell | 4.89e-13 | 2 |
hepatic mesenchymal stem cell | 4.89e-13 | 2 |
chorionic membrane mesenchymal stem cell | 1.98e-09 | 3 |
perirenal adipocyte cell | 2.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.21e-10 | 6 |
peritoneum | 5.21e-10 | 6 |
abdominal cavity | 5.21e-10 | 6 |
visceral peritoneum | 5.21e-10 | 6 |
egg chorion | 1.98e-09 | 3 |
male reproductive organ | 3.37e-09 | 11 |
male genital duct | 8.23e-09 | 3 |
internal male genitalia | 8.23e-09 | 3 |
chorion | 9.57e-09 | 7 |
adult organism | 1.06e-07 | 114 |
testis | 1.23e-07 | 8 |
nucleus accumbens | 1.25e-07 | 1 |
ventral striatum | 1.25e-07 | 1 |
vagina | 1.83e-07 | 1 |
left cardiac atrium | 2.35e-07 | 1 |
seminal vesicle | 3.01e-07 | 1 |
seminal fluid secreting gland | 3.01e-07 | 1 |
epididymis | 3.40e-07 | 1 |
reproductive organ | 3.71e-07 | 48 |
reproductive structure | 4.91e-07 | 59 |
reproductive system | 4.91e-07 | 59 |
duct of male reproductive system | 8.19e-07 | 4 |
male organism | 9.36e-07 | 22 |
male reproductive system | 9.36e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.20e-13 | 2 |
vascular disease | 3.62e-07 | 1 |
ischemia | 3.62e-07 | 1 |
extrinsic cardiomyopathy | 3.62e-07 | 1 |
myocardial ischemia | 3.62e-07 | 1 |
myocardial infarction | 3.62e-07 | 1 |
cardiovascular system disease | 6.26e-07 | 4 |