FFCP PHASE1:Hg19::chr3:45077112..45077116,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:45077112..45077116,+ | |||
|coexpression_cluster_id=C1016 | |||
|description=CAGE_peak_at_chr3:45077112..45077116,+ | |description=CAGE_peak_at_chr3:45077112..45077116,+ | ||
|id=chr3:45077112..45077116,+ | |id=chr3:45077112..45077116,+ | ||
|ontology_enrichment_celltype=CL:0002564!6.10e-07!3 | |ontology_enrichment_celltype=CL:0002564!6.10e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000214;1.36e-12;3!CL:0000135;1.52e-12;3!CL:0000388;1.52e-12;3!CL:0000062;7.65e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.29e-12,3;CL:0000135,1.53e-12,3;CL:0000388,1.53e-12,3;CL:0000062,2.60e-07,11;CL:0000375,2.60e-07,11;CL:0000335,2.60e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.62e-17;2!UBERON:0004874;7.49e-10;1!UBERON:0005754;1.61e-09;1!CL:0000335;2.54e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.35e-12!115;UBERON:0004905!1.64e-07!5;UBERON:0000982!1.64e-07!5;UBERON:0004770!1.64e-07!5;UBERON:0002242!6.10e-07!3;UBERON:0003068!6.10e-07!3;UBERON:0002328!6.10e-07!3;UBERON:0004880!6.10e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.36e-12;3!UBERON:0007616;1.36e-12;3!UBERON:0002217;1.36e-12;3!UBERON:0002018;1.36e-12;3!UBERON:0007846;1.52e-12;3!UBERON:0000043;1.52e-12;3!UBERON:0007845;1.52e-12;3!UBERON:0001723;7.35e-12;3!UBERON:0006947;7.35e-12;3!UBERON:0001033;7.35e-12;3!UBERON:0004054;7.35e-12;3!UBERON:0004905;2.73e-10;8!UBERON:0000982;2.73e-10;8!UBERON:0004770;2.73e-10;8!UBERON:0002171;5.30e-10;1!UBERON:0006518;5.30e-10;1!UBERON:0008949;5.30e-10;1!UBERON:0000101;5.30e-10;1!UBERON:0002167;5.30e-10;1!UBERON:0000989;7.49e-10;1!UBERON:0008811;7.49e-10;1!UBERON:0000998;1.61e-09;1!UBERON:0002135;1.61e-09;1!UBERON:0001301;1.61e-09;1!UBERON:0006868;1.61e-09;1!UBERON:0005904;4.05e-09;4!UBERON:0003135;2.54e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.29e-12,3;UBERON:0007616,1.29e-12,3;UBERON:0002217,1.29e-12,3;UBERON:0002018,1.29e-12,3;UBERON:0007846,1.53e-12,3;UBERON:0000043,1.53e-12,3;UBERON:0007845,1.53e-12,3;UBERON:0001723,5.28e-12,3;UBERON:0001033,5.28e-12,3;UBERON:0010056,5.28e-12,3;UBERON:0006947,7.78e-12,3;UBERON:0004054,7.78e-12,3;UBERON:0004905,2.65e-10,8;UBERON:0000982,2.65e-10,8;UBERON:0004770,2.65e-10,8;UBERON:0002171,5.79e-10,1;UBERON:0006518,5.79e-10,1;UBERON:0008949,5.79e-10,1;UBERON:0000101,5.79e-10,1;UBERON:0002167,5.79e-10,1;UBERON:0000989,6.88e-10,1;UBERON:0008811,6.88e-10,1;UBERON:0006258,6.88e-10,1;UBERON:0005876,6.88e-10,1;UBERON:0004874,6.88e-10,1;UBERON:0000998,1.62e-09,1;UBERON:0006868,1.62e-09,1;UBERON:0001301,1.76e-09,1;UBERON:0002135,2.26e-09,1;UBERON:0005904,4.23e-09,4;UBERON:0003135,2.55e-07,11;UBERON:0004876,2.55e-07,11 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,2.31978163009541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.869079113764942,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.542530047399471,0,0.356857977594324,0,0.35142424497814,1.80567659836631,2.27407504055985,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85547561184627,8.23237232399755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.290967049465258,0,2.48578814858586,0,0,0,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,1.11712960508902,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,4.14239055347196,0,0,0,0,1.08803560673895,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,1.77962244319307,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.874238242015829,0,0.735444965261716,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0,0.5290268405154,0,5.0839319149456,4.75889218336168,0,0,0,0,0,0,0,0.303114792872958,0.535928260312357,0,0,1.27940389140589,0.476128862927481,0.0645889098360061,0,0,0,0,1.30630048738177,1.71116650542641,0,0.0717222053926763,0.99798106963804,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,2.31978163009541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.869079113764942,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.542530047399471,0,0.356857977594324,0,0.35142424497814,1.80567659836631,2.27407504055985,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85547561184627,8.23237232399755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.290967049465258,0,2.48578814858586,0,0,0,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,1.11712960508902,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,4.14239055347196,0,0,0,0,1.08803560673895,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,1.77962244319307,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.874238242015829,0,0.735444965261716,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0,0.5290268405154,0,5.0839319149456,4.75889218336168,0,0,0,0,0,0,0,0.303114792872958,0.535928260312357,0,0,1.27940389140589,0.476128862927481,0.0645889098360061,0,0,0,0,1.30630048738177,1.71116650542641,0,0.0717222053926763,0.99798106963804,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p@chr3:45077112..45077116,+ | |short_description=p@chr3:45077112..45077116,+ | ||
}} | }} |
Latest revision as of 21:13, 29 July 2015
Short description: | p@chr3:45077112..45077116, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:45077112..45077116, + |
Coexpression cluster: | C1016_Mesenchymal_Synoviocyte_tenocyte_lung_mesenchymal_diaphragm_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.29e-12 | 3 |
fibrocyte | 1.53e-12 | 3 |
tendon cell | 1.53e-12 | 3 |
osteoblast | 2.60e-07 | 11 |
osteoprogenitor cell | 2.60e-07 | 11 |
mesenchyme condensation cell | 2.60e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.29e-12 | 3 |
layer of synovial tissue | 1.29e-12 | 3 |
synovial joint | 1.29e-12 | 3 |
synovial membrane of synovial joint | 1.29e-12 | 3 |
dense regular connective tissue | 1.53e-12 | 3 |
tendon | 1.53e-12 | 3 |
regular connective tissue | 1.53e-12 | 3 |
tongue | 5.28e-12 | 3 |
gustatory system | 5.28e-12 | 3 |
future tongue | 5.28e-12 | 3 |
male genital duct | 7.78e-12 | 3 |
internal male genitalia | 7.78e-12 | 3 |
articulation | 2.65e-10 | 8 |
skeletal joint | 2.65e-10 | 8 |
articular system | 2.65e-10 | 8 |
lower lobe of right lung | 5.79e-10 | 1 |
right lung lobe | 5.79e-10 | 1 |
lower lobe of lung | 5.79e-10 | 1 |
lobe of lung | 5.79e-10 | 1 |
right lung | 5.79e-10 | 1 |
penis | 6.88e-10 | 1 |
intromittent organ | 6.88e-10 | 1 |
lateral plate mesenchyme | 6.88e-10 | 1 |
undifferentiated genital tubercle | 6.88e-10 | 1 |
somatopleure | 6.88e-10 | 1 |
seminal vesicle | 1.62e-09 | 1 |
seminal fluid secreting gland | 1.62e-09 | 1 |
epididymis | 1.76e-09 | 1 |
mitral valve | 2.26e-09 | 1 |
duct of male reproductive system | 4.23e-09 | 4 |
male reproductive organ | 2.55e-07 | 11 |
urogenital ridge | 2.55e-07 | 11 |