FFCP PHASE1:Hg19::chr12:3409507..3409539,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:3409507..3409539,+
|short_description=p@chr12:3409507..3409539,+
|description=CAGE_peak_at_chr12:3409507..3409539,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:3409507..3409539,+ | |||
|description=CAGE_peak_at_chr12:3409507..3409539,+ | |||
|id=chr12:3409507..3409539,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.13e-14!254;CL:0000063!1.40e-07!578;CL:0000548!1.60e-07!679;CL:0000004!1.60e-07!679;CL:0000255!1.60e-07!679;CL:0002076!1.95e-07!43;CL:0000012!2.91e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000135;6.41e-10;3!CL:0000388;6.41e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,5.24e-10,3;CL:0000388,5.24e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.65e-14!106;DOID:1749!2.18e-11!14;DOID:0050687!2.76e-11!143;DOID:14566!4.27e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.63e-23;14!DOID:4556;1.92e-10;3!DOID:3151;6.85e-08;1!DOID:3149;6.85e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.35e-23,14;DOID:305,3.95e-13,106;DOID:4556,1.92e-10,3;DOID:0050687,6.45e-09,143;DOID:3151,1.21e-07,1;DOID:3149,1.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.96e-11!95;UBERON:0000161!5.94e-09!35;UBERON:0004119!5.32e-08!169;UBERON:0000925!5.32e-08!169;UBERON:0006595!5.32e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;6.41e-10;3!UBERON:0000043;6.41e-10;3!UBERON:0007845;6.41e-10;3!UBERON:0003343;1.20e-07;4!UBERON:0004785;1.20e-07;4!UBERON:0002394;1.75e-07;4!UBERON:0003928;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.24e-10,3;UBERON:0000043,5.24e-10,3;UBERON:0007845,5.24e-10,3;UBERON:0003343,1.39e-07,4;UBERON:0004785,1.39e-07,4 | |||
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| ||
|short_description=p@chr12:3409507..3409539,+ | |||
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Latest revision as of 08:15, 24 July 2015
Short description: | p@chr12:3409507..3409539, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:3409507..3409539, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 5.24e-10 | 3 |
tendon cell | 5.24e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 5.24e-10 | 3 |
tendon | 5.24e-10 | 3 |
regular connective tissue | 5.24e-10 | 3 |
mucosa of oral region | 1.39e-07 | 4 |
respiratory system mucosa | 1.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.35e-23 | 14 |
carcinoma | 3.95e-13 | 106 |
lung large cell carcinoma | 1.92e-10 | 3 |
cell type cancer | 6.45e-09 | 143 |
skin squamous cell carcinoma | 1.21e-07 | 1 |
keratoacanthoma | 1.21e-07 | 1 |