FFCP PHASE1:Hg19::chr19:933098..933117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:933098..933117,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr19:933098..933117,- | |description=CAGE_peak_at_chr19:933098..933117,- | ||
|id=chr19:933098..933117,- | |id=chr19:933098..933117,- | ||
|ontology_enrichment_celltype=CL:0002620!2.35e-10!23;CL:0000057!8.74e-09!75;CL:1000487!8.84e-09!2;CL:0002552!1.49e-07!5;CL:0000055!6.19e-07!180 | |ontology_enrichment_celltype=CL:0002620!2.35e-10!23;CL:0000057!8.74e-09!75;CL:1000487!8.84e-09!2;CL:0002552!1.49e-07!5;CL:0000055!6.19e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002548;2.74e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,2.74e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.24e-88;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!4.95e-21!12;UBERON:0002028!4.95e-21!12;UBERON:0007277!4.95e-21!12;UBERON:0004732!2.62e-19!13;UBERON:0002298!6.68e-18!8;UBERON:0003076!1.50e-16!15;UBERON:0003057!1.50e-16!15;UBERON:0001896!5.98e-13!3;UBERON:0005290!5.98e-13!3;UBERON:0010096!5.98e-13!3;UBERON:0000988!7.03e-13!3;UBERON:0002680!1.52e-11!9;UBERON:0001895!1.52e-11!9;UBERON:0010092!1.52e-11!9;UBERON:0002148!5.05e-09!2;UBERON:0009662!5.05e-09!2 | |ontology_enrichment_uberon=UBERON:0004733!4.95e-21!12;UBERON:0002028!4.95e-21!12;UBERON:0007277!4.95e-21!12;UBERON:0004732!2.62e-19!13;UBERON:0002298!6.68e-18!8;UBERON:0003076!1.50e-16!15;UBERON:0003057!1.50e-16!15;UBERON:0001896!5.98e-13!3;UBERON:0005290!5.98e-13!3;UBERON:0010096!5.98e-13!3;UBERON:0000988!7.03e-13!3;UBERON:0002680!1.52e-11!9;UBERON:0001895!1.52e-11!9;UBERON:0010092!1.52e-11!9;UBERON:0002148!5.05e-09!2;UBERON:0009662!5.05e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.76e-45;6!UBERON:0002680;2.66e-30;9!UBERON:0001895;2.66e-30;9!UBERON:0004733;4.59e-23;12!UBERON:0002028;4.59e-23;12!UBERON:0004732;2.16e-21;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.76e-45,6;UBERON:0006215,9.76e-45,6;UBERON:0002680,2.66e-30,9;UBERON:0001895,2.66e-30,9;UBERON:0010092,2.66e-30,9;UBERON:0004733,4.59e-23,12;UBERON:0002028,4.59e-23,12;UBERON:0007277,4.59e-23,12;UBERON:0004732,2.16e-21,13;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15 | |||
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|short_description=p@chr19:933098..933117,- | |short_description=p@chr19:933098..933117,- | ||
}} | }} |
Latest revision as of 18:46, 27 July 2015
Short description: | p@chr19:933098..933117, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:933098..933117, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.76e-45 | 6 |
rhombic lip | 9.76e-45 | 6 |
regional part of metencephalon | 2.66e-30 | 9 |
metencephalon | 2.66e-30 | 9 |
future metencephalon | 2.66e-30 | 9 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |