FFCP PHASE1:Hg19::chr12:322510..322551,-: Difference between revisions
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|id=chr12:322510..322551,-
|short_description=p17@SLC6A12
|description=CAGE_peak_17_at_SLC6A12_5end
|association_with_transcript=-6bp_to_ENST00000424061_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6539 | |EntrezGene=6539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11045 | |HGNC=11045 | ||
|TSSclassifier=strong | |||
|UniProt=P48065 | |UniProt=P48065 | ||
|association_with_transcript=-6bp_to_ENST00000424061_5end | |||
|cluster_id=chr12:322510..322551,- | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_17_at_SLC6A12_5end | |||
|id=chr12:322510..322551,- | |||
|ontology_enrichment_celltype=CL:0000453!1.51e-42!5;CL:0000990!1.23e-23!8;CL:0000451!2.52e-19!10;CL:0001014!1.59e-18!2;CL:0001016!1.59e-18!2;CL:0002575!1.13e-17!2;CL:0000763!1.01e-08!112;CL:0000049!1.01e-08!112;CL:0000669!1.32e-07!5;CL:0000840!9.47e-07!5;CL:0001029!9.47e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.68e-99;2!CL:0001016;5.68e-99;2!CL:0002032;5.12e-50;1!CL:0000557;5.12e-50;1!CL:0000453;1.81e-40;5!CL:0000840;5.98e-34;5!CL:0000990;4.59e-23;8!CL:0000451;4.28e-19;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.68e-99,2;CL:0001016,5.68e-99,2;CL:0000453,1.81e-40,5;CL:0000840,5.98e-34,5;CL:0001029,5.98e-34,5;CL:0000990,4.59e-23,8;CL:0000451,4.28e-19,10;CL:0000557,1.88e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002581!2.67e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p17@SLC6A12 | |||
}} | }} |
Latest revision as of 04:28, 18 September 2015
Short description: | p17@SLC6A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SLC6A12_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -6bp_to_ENST00000424061_5end |
EntrezGene: | SLC6A12 |
HGNC: | 11045 |
UniProt: | P48065 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.68e-99 | 2 |
immature CD1a-positive Langerhans cell | 5.68e-99 | 2 |
Langerhans cell | 1.81e-40 | 5 |
immature conventional dendritic cell | 5.98e-34 | 5 |
common dendritic progenitor | 5.98e-34 | 5 |
conventional dendritic cell | 4.59e-23 | 8 |
dendritic cell | 4.28e-19 | 10 |
granulocyte monocyte progenitor cell | 1.88e-07 | 67 |