FFCP PHASE1:Hg19::chr12:3068957..3068978,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:3068957..3068978,+
|short_description=p6@TEAD4
|description=CAGE_peak_6_at_TEAD4_5end
|association_with_transcript=0bp_to_ENST00000543035,uc001qln.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7004 | |EntrezGene=7004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11717 | |HGNC=11717 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000543035,uc001qln.2_5end | |||
|cluster_id=chr12:3068957..3068978,+ | |||
|description=CAGE_peak_6_at_TEAD4_5end | |||
|id=chr12:3068957..3068978,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.65e-12!180;CL:0000222!1.31e-10!119;CL:0000220!3.96e-10!246;CL:0002321!6.69e-10!248;CL:0000187!1.78e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000188;3.74e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.41e-09,121;CL:0000115,6.45e-08,36;CL:0000188,5.76e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.28e-16!347;UBERON:0003104!4.40e-15!238;UBERON:0009142!4.40e-15!238;UBERON:0002100!1.25e-12!216;UBERON:0000119!3.33e-12!312;UBERON:0000483!5.39e-12!309;UBERON:0000468!5.97e-12!659;UBERON:0000477!2.04e-11!286;UBERON:0003914!4.11e-11!118;UBERON:0004872!9.50e-11!84;UBERON:0000475!2.24e-10!365;UBERON:0005256!2.38e-10!143;UBERON:0003103!2.90e-10!69;UBERON:0000467!3.76e-10!625;UBERON:0000480!5.65e-10!626;UBERON:0000490!6.00e-10!138;UBERON:0000914!3.66e-09!83;UBERON:0002329!3.66e-09!83;UBERON:0003077!3.66e-09!83;UBERON:0003059!3.66e-09!83;UBERON:0007282!3.66e-09!83;UBERON:0009618!3.66e-09!83;UBERON:0007285!3.66e-09!83;UBERON:0001009!3.80e-09!113;UBERON:0000486!4.05e-09!82;UBERON:0002385!7.60e-09!63;UBERON:0001015!7.60e-09!63;UBERON:0000383!7.60e-09!63;UBERON:0007100!9.59e-09!27;UBERON:0004290!1.04e-08!70;UBERON:0002049!1.27e-08!79;UBERON:0007798!1.27e-08!79;UBERON:0001134!1.42e-08!61;UBERON:0002036!1.42e-08!61;UBERON:0003082!1.42e-08!61;UBERON:0004111!1.93e-08!241;UBERON:0000055!3.33e-08!69;UBERON:0004535!4.46e-08!110;UBERON:0004119!2.42e-07!169;UBERON:0000925!2.42e-07!169;UBERON:0006595!2.42e-07!169;UBERON:0001981!2.49e-07!60;UBERON:0007500!2.49e-07!60;UBERON:0004537!2.49e-07!60;UBERON:0006965!2.49e-07!60;UBERON:0000948!3.88e-07!24;UBERON:0005498!3.88e-07!24;UBERON:0004140!3.88e-07!24;UBERON:0009881!3.88e-07!24;UBERON:0004141!3.88e-07!24;UBERON:0003084!3.88e-07!24;UBERON:0007005!3.88e-07!24;UBERON:0004139!3.88e-07!24;UBERON:0004291!3.88e-07!24;UBERON:0001048!9.14e-07!168;UBERON:0000922!9.50e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.51e-11;16!UBERON:0002036;2.51e-11;16!UBERON:0002385;3.22e-08;31!UBERON:0001015;3.22e-08;31!UBERON:0000383;3.22e-08;31!UBERON:0004151;9.09e-08;3!UBERON:0001723;6.99e-07;3!UBERON:0001033;6.99e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,5.37e-09,112;UBERON:0000055,9.22e-09,68;UBERON:0001134,7.70e-08,62;UBERON:0002036,7.70e-08,62;UBERON:0003082,7.70e-08,62;UBERON:0004151,9.35e-08,3;UBERON:0002049,1.06e-07,78;UBERON:0007798,1.06e-07,78;UBERON:0004872,1.22e-07,83;UBERON:0007503,1.52e-07,78;UBERON:0007524,1.59e-07,73;UBERON:0003914,1.62e-07,117;UBERON:0002385,1.92e-07,64;UBERON:0001015,1.92e-07,64;UBERON:0000383,1.92e-07,64;UBERON:0004535,3.91e-07,109;UBERON:0003103,5.13e-07,68;UBERON:0002329,5.20e-07,71;UBERON:0003059,5.20e-07,71;UBERON:0007282,5.20e-07,71;UBERON:0004290,5.20e-07,71;UBERON:0009618,5.20e-07,71;UBERON:0003077,7.61e-07,72;UBERON:0007285,7.61e-07,72;UBERON:0001723,7.61e-07,3;UBERON:0001033,7.61e-07,3;UBERON:0010056,7.61e-07,3;UBERON:0000486,8.63e-07,83 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0.261185628199839,0.982935746006035,0.697801167972428,0.218441372130172,0,0.37129905888014,0.994192127183747,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.738726348460727,0.408001382488506,0.626909442956176,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0,0.50133791063589,1.01392563272577,0,0.973269740605272,0.283604451492204,0.221729397462564,0.263504357079378,0.261958150995425,1.09288586487763,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,1.69592382577203,0,0.275118041940067,2.08994966536811,0.516833518338658,0.35576626268671,0,0.402829317109147,0,1.22031028774085,1.10298924103761,0,0.803697554556718,1.34717623575702,1.57656072676651,0,2.84779697870439,0.916008719652036,0,0,0.436094052142534,0,0.506522046658319,0,1.14734648299525,1.77334191099179,2.80338800071154,1.06748995729705,0.98667019366864,0.622422070799533,0.808264032418128,1.14423332179421,0,0,0.468642863667593,0.936480230490962,1.1409436430889,0.298897361103602,0.939475989150119,0.323745888736263,0.561803226808994,0.408308342509787,0.368502951935304,0.929932030581889,0,0.247266929278557,0,2.15585442544872,0.168336113954066,0.500474079487857,0,1.31693286264251,0.30648779579902,0.300476117813194,0.680593098960126,0.717558542755448,0.213557388818567,0,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0,0.779496041289589,0,0.644349290496095,0.323292113637624,0.355009592516614,0.503760491138201,1.01736355386293,0.386521706326594,0,0.860413786167011,0,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0.721879481669586,0.236613600079688,0.505754070234305,0.723033089650446,0.110293972732394,0.653638332277218,0.237270619111097,0.404493924480493,0.784885860501384,0.38474715694639,0,4.20725321410337,0.8231480226628,0,0,0.982827216677626,0.590789906681404,0,0,0.686271241194102,0,0,0.100528972411631,0.555530670951178,0,1.03993478527958,0,0.463721619900307,0.352226082707465,1.44366447761074,2.31492756288305,2.28304982681518,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0.144119953416961,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.2933531432838,0.129271715757778,3.57656445851882,4.22651376278,0.531876233169741,0,0.514414748524284,0,0.799266537048298,0.142977993658148,0.542621605391443,1.64648067356154,0.325736184293735,0,0.791951872933429,0,0,0.499864955910285,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.49076596687656,0.500170521059677,0.271265023699736,1.03985430765404,0.713715955188647,1.10391690523754,0.117141414992713,0.300946099727719,0,1.03473071292505,0,2.02806085395873,0.260650843404249,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,0.153461973288062,0.841980283299221,0.256278298511402,0,0.321707842287215,0,0.771048469013278,1.06537035187876,1.39616165223476,0,1.04589340613963,0.241718899183244,0,0,0.459257792658427,0.728364672026868,0.655622074797121,0.451199612907412,0,0,1.46139224653261,0.316654886678627,1.13733384070897,0.510281115829547,0.431831832204279,3.08454505380579,0,0,0,0,0.223874754722178,0,0,0.256450125116389,1.31205858279882,0,0.309123034943167,0.0915694648183434,0.082509499920588,0.574265537996172,0.650060246036521,0,1.16004861950546,0.770243085573222,1.38153307253517,1.24052915236078,0.429680979473094,1.0151168573996,1.27839941124151,0.445160178233687,0.330569830721956,0.768760269460425,0.382838137483752,0.30347334256665,0,0,0,1.23213432070436,1.06461206063404,0,0.18532421910392,0,0,0.316379424718726,0.953150969619124,1.02359116524534,0,0.318203247925937,0,0.719489830333259,0,0.353437207037059,0.404364963146632,0,0.842516912477962,1.95053495635836,0.974853958525138,0,0.409499734223957,1.97967604735198,2.26016233240486,0.551365343546124,0.66343897524122,0,0,1.9676842561399,0.608731130888112,1.8589409885985,1.12678241012897,0.717056761020258,0.687743287091848,0.35667105148125,0.709522128141196,1.68886108238131,0.987884678879706,0.379473173765715,1.04980416073495,0.48111056362756,2.68120910214315,0,0.376575203107117,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.61158997199083,0.36408156524854,0,1.70481688083848,0,0,0,0,0,0,0,0.422250816255987,1.59398390600856,0.828851746593443,0,0.20453736500431,0,0,0.179736702294654,0,0,0.986434056369336,0,0,0.969332746095218,0.371072392647405,0,0,0.0874599999961957,1.44999915086959,0.796554137998498,0.254253650292766,1.41832609060762,0,0,0,0,0.1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| ||
|short_description=p6@TEAD4 | |||
}} | }} |
Latest revision as of 02:37, 18 September 2015
Short description: | p6@TEAD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TEAD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000543035, uc001qln.2_5end |
EntrezGene: | TEAD4 |
HGNC: | 11717 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.41e-09 | 121 |
endothelial cell | 6.45e-08 | 36 |
cell of skeletal muscle | 5.76e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 5.37e-09 | 112 |
vessel | 9.22e-09 | 68 |
skeletal muscle tissue | 7.70e-08 | 62 |
striated muscle tissue | 7.70e-08 | 62 |
myotome | 7.70e-08 | 62 |
cardiac chamber | 9.35e-08 | 3 |
vasculature | 1.06e-07 | 78 |
vascular system | 1.06e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 1.22e-07 | 83 |
epithelial vesicle | 1.52e-07 | 78 |
dense mesenchyme tissue | 1.59e-07 | 73 |
epithelial tube | 1.62e-07 | 117 |
muscle tissue | 1.92e-07 | 64 |
musculature | 1.92e-07 | 64 |
musculature of body | 1.92e-07 | 64 |
cardiovascular system | 3.91e-07 | 109 |
compound organ | 5.13e-07 | 68 |
somite | 5.20e-07 | 71 |
presomitic mesoderm | 5.20e-07 | 71 |
presumptive segmental plate | 5.20e-07 | 71 |
dermomyotome | 5.20e-07 | 71 |
trunk paraxial mesoderm | 5.20e-07 | 71 |
paraxial mesoderm | 7.61e-07 | 72 |
presumptive paraxial mesoderm | 7.61e-07 | 72 |
tongue | 7.61e-07 | 3 |
gustatory system | 7.61e-07 | 3 |
future tongue | 7.61e-07 | 3 |
multilaminar epithelium | 8.63e-07 | 83 |