FFCP PHASE1:Hg19::chr3:190040744..190040766,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9076 | |EntrezGene=9076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2032 | |HGNC=2032 | ||
|TSSclassifier=strong | |||
|UniProt=O95832 | |UniProt=O95832 | ||
|association_with_transcript=-480bp_to_ENST00000295522_5end | |association_with_transcript=-480bp_to_ENST00000295522_5end | ||
|cluster_id=chr3:190040744..190040766,- | |||
|coexpression_cluster_id=C4314 | |||
|description=CAGE_peak_4_at_CLDN1_5end | |description=CAGE_peak_4_at_CLDN1_5end | ||
|id=chr3:190040744..190040766,- | |id=chr3:190040744..190040766,- | ||
|ontology_enrichment_celltype=CL:0000223!4.96e-14!59;CL:0000066!2.13e-12!254;CL:0002076!3.05e-12!43 | |ontology_enrichment_celltype=CL:0000223!4.96e-14!59;CL:0000066!2.13e-12!254;CL:0002076!3.05e-12!43 | ||
|ontology_enrichment_celltype_v019=CL:0001014;4.24e-21;2!CL:0001016;4.24e-21;2!CL:0002166;4.13e-14;3!CL:0002159;1.67e-11;14!CL:0000453;5.27e-09;5!CL:0000840;1.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.13e-21,2;CL:0001016,3.13e-21,2;CL:0002166,2.96e-14,3;CL:0002159,1.27e-11,14;CL:0000453,4.68e-09,5;CL:0000840,1.09e-07,5;CL:0001029,1.09e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.83e-09;5 | |||
|ontology_enrichment_disease=DOID:120!2.66e-08!27;DOID:1749!4.42e-08!14;DOID:193!1.77e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.64e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.28e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.91e-09!169;UBERON:0000925!1.91e-09!169;UBERON:0006595!1.91e-09!169;UBERON:0000466!8.02e-08!126;UBERON:0005911!1.05e-07!82;UBERON:0000481!1.82e-07!347;UBERON:0000344!3.18e-07!12;UBERON:0000923!5.21e-07!604;UBERON:0005291!5.21e-07!604;UBERON:0006598!5.21e-07!604;UBERON:0002532!5.21e-07!604;UBERON:0002050!5.96e-07!605;UBERON:0005423!5.96e-07!605;UBERON:0001007!5.98e-07!155;UBERON:0001555!5.98e-07!155;UBERON:0007026!5.98e-07!155;UBERON:0001048!6.55e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;3.28e-11;1!UBERON:0001708;8.11e-11;4!UBERON:0008895;8.11e-11;4!UBERON:0002046;5.83e-09;5!UBERON:0011159;7.85e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008814,7.64e-14,18;UBERON:0006834,1.97e-11,1;UBERON:0001708,6.33e-11,4;UBERON:0008895,6.33e-11,4;UBERON:0011159,6.44e-09,5;UBERON:0002046,6.98e-09,5;UBERON:0004117,6.98e-09,5;UBERON:0007689,6.98e-09,5;UBERON:0007123,6.98e-09,5;UBERON:0003091,6.98e-09,5;UBERON:0010188,1.43e-07,6;UBERON:0002539,1.43e-07,6;UBERON:0008816,1.43e-07,6 | |||
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| ||
|short_description=p4@CLDN1 | |short_description=p4@CLDN1 | ||
}} | }} |
Latest revision as of 09:50, 17 September 2015
Short description: | p4@CLDN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLDN1_5end |
Coexpression cluster: | C4314_oral_endometrial_malignant_uterus_squamous_immature_Keratinocyte |
Association with transcript: | -480bp_to_ENST00000295522_5end |
EntrezGene: | CLDN1 |
HGNC: | 2032 |
UniProt: | O95832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.13e-21 | 2 |
immature CD1a-positive Langerhans cell | 3.13e-21 | 2 |
epithelial cell of Malassez | 2.96e-14 | 3 |
general ecto-epithelial cell | 1.27e-11 | 14 |
Langerhans cell | 4.68e-09 | 5 |
immature conventional dendritic cell | 1.09e-07 | 5 |
common dendritic progenitor | 1.09e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pharyngeal arch system | 7.64e-14 | 18 |
uterus or analog | 1.97e-11 | 1 |
jaw skeleton | 6.33e-11 | 4 |
splanchnocranium | 6.33e-11 | 4 |
primary subdivision of cranial skeletal system | 6.44e-09 | 5 |
thyroid gland | 6.98e-09 | 5 |
pharyngeal pouch | 6.98e-09 | 5 |
thyroid diverticulum | 6.98e-09 | 5 |
pharyngeal pouch 2 | 6.98e-09 | 5 |
thyroid primordium | 6.98e-09 | 5 |
protuberance | 1.43e-07 | 6 |
pharyngeal arch | 1.43e-07 | 6 |
embryonic head | 1.43e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.28e-12 | 14 |