FFCP PHASE1:Hg19::chr12:248165..248209,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:248165..248209,+
|short_description=p1@IQSEC3
|description=CAGE_peak_1_at_IQSEC3_5end
|association_with_transcript=310bp_to_AB029033_5end
|EntrezGene=440...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=440073 | |EntrezGene=440073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29193 | |HGNC=29193 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPP2 | |UniProt=Q9UPP2 | ||
|association_with_transcript=310bp_to_AB029033_5end | |||
|cluster_id=chr12:248165..248209,+ | |||
|description=CAGE_peak_1_at_IQSEC3_5end | |||
|id=chr12:248165..248209,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000669;3.34e-08;4!CL:1000507;5.59e-08;10!CL:1000494;5.59e-08;10!CL:0000650;1.55e-07;2!CL:1000500;1.55e-07;2!CL:1000618;1.55e-07;2!CL:1001318;1.55e-07;2!CL:0002173;1.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,3.09e-08,4;CL:1000507,5.76e-08,10;CL:1000494,5.76e-08,10;CL:0000650,1.61e-07,2;CL:1000500,1.61e-07,2;CL:1000618,1.61e-07,2;CL:1001318,1.61e-07,2;CL:0002173,1.61e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.73e-36!115;UBERON:0002616!3.08e-17!59;UBERON:0001049!3.17e-16!57;UBERON:0005068!3.17e-16!57;UBERON:0006241!3.17e-16!57;UBERON:0007135!3.17e-16!57;UBERON:0003080!9.55e-14!42;UBERON:0000955!2.76e-13!69;UBERON:0006238!2.76e-13!69;UBERON:0002780!4.10e-13!41;UBERON:0001890!4.10e-13!41;UBERON:0006240!4.10e-13!41;UBERON:0002020!8.27e-13!34;UBERON:0003528!8.27e-13!34;UBERON:0001893!2.14e-12!34;UBERON:0001017!2.45e-12!82;UBERON:0003075!3.04e-12!86;UBERON:0007284!3.04e-12!86;UBERON:0005743!4.67e-12!86;UBERON:0002791!8.04e-12!33;UBERON:0002346!1.26e-11!90;UBERON:0001869!1.44e-11!32;UBERON:0000073!1.21e-09!94;UBERON:0001016!1.21e-09!94;UBERON:0003056!1.30e-08!61;UBERON:0002619!1.58e-08!22;UBERON:0002308!1.62e-08!9;UBERON:0000125!1.62e-08!9;UBERON:0001950!1.99e-08!20;UBERON:0000153!8.19e-08!129;UBERON:0007811!8.19e-08!129;UBERON:0009663!4.48e-07!7;UBERON:0002420!5.53e-07!9;UBERON:0007245!5.53e-07!9;UBERON:0010009!5.53e-07!9;UBERON:0010011!5.53e-07!9;UBERON:0000454!5.53e-07!9;UBERON:0000956!5.72e-07!25;UBERON:0000203!5.72e-07!25;UBERON:0002298!5.85e-07!8;UBERON:0000033!9.31e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.59e-08;10!UBERON:0009773;5.59e-08;10!UBERON:0001231;5.59e-08;10!UBERON:0004810;5.59e-08;10!UBERON:0003567;1.55e-07;2!UBERON:0003838;1.55e-07;2!UBERON:0003586;1.55e-07;2!UBERON:0005169;1.55e-07;2!UBERON:0002321;1.55e-07;2!UBERON:0005215;1.55e-07;2!UBERON:0002303;1.55e-07;2!UBERON:0002319;1.55e-07;2!UBERON:0001950;6.12e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.42e-15,114;UBERON:0004810,5.76e-08,10;UBERON:0003567,1.61e-07,2;UBERON:0003838,1.61e-07,2;UBERON:0003586,1.61e-07,2;UBERON:0005169,1.61e-07,2;UBERON:0002321,1.61e-07,2;UBERON:0005215,1.61e-07,2;UBERON:0002303,1.61e-07,2;UBERON:0002319,1.61e-07,2;UBERON:0000073,2.73e-07,53;UBERON:0002616,2.73e-07,53;UBERON:0002780,2.84e-07,41;UBERON:0001890,2.84e-07,41;UBERON:0003080,2.84e-07,41;UBERON:0006240,2.84e-07,41;UBERON:0001950,6.30e-07,20;UBERON:0001049,9.16e-07,56;UBERON:0005068,9.16e-07,56;UBERON:0006241,9.16e-07,56;UBERON:0007135,9.16e-07,56 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,2.05520307534393,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,3.16060901730092,0.590129310341499,0,0,0.334372990781356,0.651844533267181,0,0,0.222820913770347,0,0,0,0,0,0,0,0,1.63115219478266,0,0,0,0,0,0,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0,0,2.60683926989038,4.87613732627923,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.458426764241994,0,0,0.324547393654683,0,0,0,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0,0.485618833104395,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0,0.226864366320042,0,0,0,0.300091096084402,0.412210116953756,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0.276149695926898,0.80823028409406,1.06502877754984,0.503760491138201,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.880484340132261,2.90259361757081,1.72943944100354,0.25248486685276,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0.36669142910475,0,7.15312891703765,0,0,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,1.29964888536674,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0,0.979005787313703,3.77457766191941,0,1.2942852049117,0.213455115606889,0,0,0,0,0.153461973288062,0,0.512556597022804,0,0.160853921143607,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,3.15839729035188,1.23224539367064,1.56869953835371,0,0.527758144464379,0,0,0.215915916102139,0,1.35473218771926,2.50844886927427,0.509752546090077,0,0.895499018888713,0,0,0,0,0,0.618246069886334,0,0,0.574265537996172,0,0,0,0,0,0.689182862422653,0.859361958946189,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,1.86079184679834,0,0.571890581771475,0,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0.842516912477962,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,1.08890984861323,0.470719003883896,0,0,0,0,0,0,0,0.238231775457789,0,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,2.81338832821025,0,0,0,1.19548792950642,1.38141957765574,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,1.80894657938112,0,1.10579259931225,0.591095237907095,0.87754158861589,0,0,3.00106008164809,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,0.884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.30607276163049,6.12909822396333,0,0,0,0,0,0,0,0,0,0,3.74354588295731,0.17472666824203,0,0,0,0,0.193978032976839,0,1.58186518546373,0,0,0.759729551470544,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.547621515567972,0,0,0,2.23425921017803,0.458320848023367,0,0,0.858452096273142,1.78537165953498,0.671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.953423842781029,0.160753148465019,0,0,0.2249738915515,0,0.850493793212345,0,0.236417121897595,2.09818352539992,0,0,0,0,0,0,0,0,1.30634944043764,0,0,0,0,0,0,0.646414781807753,0.79339561045614,0,0,0.640724475406168,0.471612915298998,0,0,0,0,0,0.544017803369474,0.2506898940227,1.22538230705385,3.27872630709804,0,0,0.610131324509816,2.6290095448365,1.14681839138014,0.887432412294818,0.372578417648301,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0.521745061811734,1.35231848097497,1.52322084867518,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.899209151350433,0,3.19267718114303,0.615349092722265,0,1.1756732918917,0.484426936895553,0,0,0,0,0,0,0,0,3.38446477571658,0,0,0,0,0,0.540300676947157,0.781078098613847,3.10030194751776,0.824405532520789,0,0,0.992422356778588,0,0,2.67850917939143,0.336283722218824,0,0,0.354809480650555,0,0,0.40781839786099,1.51277379194553,0,0,1.64835494986079,0.785577949580009,0,0.913158720509496,0,0,3.00201485541957,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0.22910686854405,0,0,0,0,0,0.647428837187895,0.307988420568741,0,1.45713297917742,0,0.198950775161368,0,0,0,0,0.385870790539723,0,0,0.735444965261716,0,0.981542335574726,0,0,0.339854229375634,0.469919589899268,0.773494655682926,0,0,0,0,0.730336388246517,0,0.43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| ||
|short_description=p1@IQSEC3 | |||
}} | }} |
Latest revision as of 21:26, 17 September 2015
Short description: | p1@IQSEC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IQSEC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 310bp_to_AB029033_5end |
EntrezGene: | IQSEC3 |
HGNC: | 29193 |
UniProt: | Q9UPP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 3.09e-08 | 4 |
kidney tubule cell | 5.76e-08 | 10 |
nephron tubule epithelial cell | 5.76e-08 | 10 |
mesangial cell | 1.61e-07 | 2 |
kidney interstitial cell | 1.61e-07 | 2 |
juxtaglomerular complex cell | 1.61e-07 | 2 |
renal interstitial pericyte | 1.61e-07 | 2 |
extraglomerular mesangial cell | 1.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.42e-15 | 114 |
nephron tubule epithelium | 5.76e-08 | 10 |
abdomen connective tissue | 1.61e-07 | 2 |
abdominal segment connective tissue | 1.61e-07 | 2 |
trunk connective tissue | 1.61e-07 | 2 |
interstitial tissue | 1.61e-07 | 2 |
extraglomerular mesangium | 1.61e-07 | 2 |
kidney interstitium | 1.61e-07 | 2 |
juxtaglomerular apparatus | 1.61e-07 | 2 |
mesangium | 1.61e-07 | 2 |
regional part of nervous system | 2.73e-07 | 53 |
regional part of brain | 2.73e-07 | 53 |
regional part of forebrain | 2.84e-07 | 41 |
forebrain | 2.84e-07 | 41 |
anterior neural tube | 2.84e-07 | 41 |
future forebrain | 2.84e-07 | 41 |
neocortex | 6.30e-07 | 20 |
neural tube | 9.16e-07 | 56 |
neural rod | 9.16e-07 | 56 |
future spinal cord | 9.16e-07 | 56 |
neural keel | 9.16e-07 | 56 |