FFCP PHASE1:Hg19::chr12:2162447..2162462,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:2162447..2162462,+
|short_description=p3@CACNA1C
|description=CAGE_peak_3_at_CACNA1C_5end
|association_with_transcript=-1bp_to_ENST00000335762,ENST0000039...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=775 | |EntrezGene=775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1390 | |HGNC=1390 | ||
|TSSclassifier=strong | |||
|UniProt=F5H522 | |UniProt=F5H522 | ||
|association_with_transcript=-1bp_to_ENST00000335762,ENST00000399655_5end | |||
|cluster_id=chr12:2162447..2162462,+ | |||
|coexpression_cluster_id=C3266 | |||
|description=CAGE_peak_3_at_CACNA1C_5end | |||
|id=chr12:2162447..2162462,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.60e-08!75;CL:0002620!2.89e-08!23;CL:0000055!4.29e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.75e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.77e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.52e-27!115;UBERON:0001017!7.16e-20!82;UBERON:0000955!3.13e-19!69;UBERON:0006238!3.13e-19!69;UBERON:0005743!3.80e-19!86;UBERON:0001049!4.61e-19!57;UBERON:0005068!4.61e-19!57;UBERON:0006241!4.61e-19!57;UBERON:0007135!4.61e-19!57;UBERON:0000073!6.36e-18!94;UBERON:0001016!6.36e-18!94;UBERON:0002616!3.79e-17!59;UBERON:0001893!1.10e-16!34;UBERON:0002020!1.37e-16!34;UBERON:0003528!1.37e-16!34;UBERON:0001869!5.72e-16!32;UBERON:0002791!6.59e-16!33;UBERON:0002780!2.09e-15!41;UBERON:0001890!2.09e-15!41;UBERON:0006240!2.09e-15!41;UBERON:0002619!7.64e-15!22;UBERON:0003080!9.15e-15!42;UBERON:0003075!3.49e-14!86;UBERON:0007284!3.49e-14!86;UBERON:0000956!3.53e-14!25;UBERON:0000203!3.53e-14!25;UBERON:0002346!4.16e-14!90;UBERON:0001950!3.69e-13!20;UBERON:0000033!1.40e-12!123;UBERON:0000475!2.57e-12!365;UBERON:0000153!5.17e-12!129;UBERON:0007811!5.17e-12!129;UBERON:0000924!1.12e-10!173;UBERON:0006601!1.12e-10!173;UBERON:0004121!1.45e-10!169;UBERON:0003056!2.72e-09!61;UBERON:0000468!1.48e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.84e-28;22!UBERON:0000956;9.66e-25;25!UBERON:0000203;9.66e-25;25!UBERON:0001869;3.07e-24;32!UBERON:0001950;1.37e-23;20!UBERON:0002791;3.64e-21;32!UBERON:0001893;3.92e-21;34!UBERON:0003528;8.79e-20;34!UBERON:0002020;8.79e-20;34!UBERON:0002780;2.02e-16;41!UBERON:0001890;2.02e-16;41!UBERON:0000073;1.72e-12;53!UBERON:0002616;1.72e-12;53!UBERON:0002021;2.60e-10;5!UBERON:0000349;2.60e-10;5!UBERON:0000200;4.13e-09;6!UBERON:0001871;8.30e-08;6!UBERON:0000955;9.70e-08;68!UBERON:0001017;1.66e-07;75!UBERON:0001954;2.87e-07;2!UBERON:0003022;2.87e-07;2!UBERON:0002421;2.87e-07;2!UBERON:0002600;2.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.38e-29,22;UBERON:0001869,2.11e-27,32;UBERON:0001893,1.44e-25,34;UBERON:0000956,4.86e-25,25;UBERON:0000203,4.86e-25,25;UBERON:0002791,2.31e-24,32;UBERON:0001950,7.16e-24,20;UBERON:0003528,1.01e-22,34;UBERON:0002020,1.01e-22,34;UBERON:0000073,6.74e-21,53;UBERON:0002616,6.74e-21,53;UBERON:0002780,1.56e-20,41;UBERON:0001890,1.56e-20,41;UBERON:0003080,1.56e-20,41;UBERON:0006240,1.56e-20,41;UBERON:0001049,1.64e-19,56;UBERON:0005068,1.64e-19,56;UBERON:0006241,1.64e-19,56;UBERON:0007135,1.64e-19,56;UBERON:0007023,3.11e-18,114;UBERON:0000955,1.05e-16,68;UBERON:0006238,1.05e-16,68;UBERON:0001017,9.05e-15,81;UBERON:0003075,1.33e-14,82;UBERON:0007284,1.33e-14,82;UBERON:0003056,4.62e-14,61;UBERON:0002346,1.14e-13,86;UBERON:0010314,6.52e-13,132;UBERON:0010371,8.58e-13,104;UBERON:0001016,9.17e-13,89;UBERON:0002021,2.38e-10,5;UBERON:0000349,3.05e-10,5;UBERON:0000200,4.27e-09,6;UBERON:0001871,6.87e-08,6;UBERON:0004121,1.40e-07,171;UBERON:0000924,1.40e-07,171;UBERON:0006601,1.40e-07,171;UBERON:0001954,2.46e-07,2;UBERON:0003022,2.46e-07,2;UBERON:0002421,2.46e-07,2;UBERON:0002600,2.46e-07,2 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0.738726348460727,0.408001382488506,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,1.45990461090791,0,0.221729397462564,0.087834785693126,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0.529636723252875,1.14734648299525,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0.408308342509787,0.245668634623536,0.309977343527296,0,0.741800787835671,0,0,0,0.375355559615893,0.277064115484183,0.438977620880838,0.919463387397059,0.600952235626387,0,1.61450672119976,0.427114777637135,0.423863802319124,1.50045548042201,1.03052529238439,0.515281080091258,0.37223371266318,1.5189869901714,0.389748020644795,2.77677151668526,1.47279837827679,4.52608959092673,2.84007674013291,0.302256294682921,0.508681776931463,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,4.69348596989448,1.28648187638577,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,0,1.01346914667305,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,2.07970861530807,2.14114786556594,1.73472656537328,0.937131319941706,0,0,0,0,0.737476674166813,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.248107807818777,1.07423381301644,0.280660094433074,0.512556597022804,0,0.965123526861645,0,0.308419387605311,0.532685175939381,0.410635780069046,0,0.348631135379878,0.120859449591622,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,1.07420244868274,0.145016693914229,0.170453254832202,0.356128142586949,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0,0.471249609382746,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.633322905892992,1.97576935775941,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54736358051564,0,0,0.211125408127993,2.19172787076177,0.552567831062295,0.251932747854276,0,0,0,0,0,0,0.887790650732402,0,0,0.969332746095218,0.927680981618513,3.99227596002388,0,0,0,0,0,0,0,0.291604613383254,0.694499979733169,0,1.20596438625408,0,1.54810963903714,0.591095237907095,0.658156191461918,0,0,2.38545801361771,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,1.32686346755009,0,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0,2.36750641709634,0,1.53036380815245,2.59064976476801,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,1.83601308272048,0,0,0.640358984218058,0,0,0,0,0,0,0,0.271808412147228,0,0.407992870545287,0.288950589901519,0.600420288709789,0,0,0,0,0.837847203816763,1.83328339209347,0.717873024576814,0.798716001995964,0.429226048136571,0.446342914883745,1.41085292222125,0,0,0,0,0,0,0,1.59045937961861,1.22583065500418,0,0.137539436597234,0,0,0,2.00473536971481,0,0.315222829196793,0.944182586429966,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0.082092520749339,0.511164065356265,0.339936274560377,0,0,0.517131825446202,0.52893040697076,0,0,0.533937062838473,1.57204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.610131324509816,1.502291168478,1.14681839138014,0,0.931446044120752,0.138348634936231,0,0,0,0,0,0.434763085832475,0.74627401443437,0.934853239388898,1.66441758450784,0.947015026375446,1.25783950876288,0.889811221596536,0,0,0.310874401165561,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0.521745061811734,0.450772826991655,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0.109209638192014,0,0.425149840203366,0,0,0,0,0,0.352675943690684,0,1.02766760154335,1.41696576325585,1.59633859057151,0.82046545696302,1.00828678488687,1.59061680667701,1.13032951942296,0,0,0,0,0,1.52552838186867,0,0.596748666348824,0.451261970095544,0.20170506870352,0,0,0,0,1.2156765231311,0.781078098613847,3.30698874401895,0.887821342714695,0.546974809018219,0,0.496211178389294,0.175871244359621,0,0,0,0.606965604236632,0.682986574053893,0.443511850813194,0,0,1.08751572762931,2.56513816895111,0,0,0.706437835654626,0.628462359664008,0,1.82631744101899,0,0,1.42953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0.219881033490858,0,0.694567422971502,0.437119121007915,0,3.67722482630858,0,0,0.891139200981258,0.8453114551668,0.339854229375634,0.375935671919414,1.03132620757723,0,0,0,0,0.730336388246517,0.917458566809082,0.286679166302903,0.946629373159108,2.03974470572744,1.30905207102113,0,0,1.84870251452567,0,0,0,0,0.203977659483963,0,0,0,0.530450887527676,0.535928260312357,0,0.413731983447581,0,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,1.08858373948481,0,0.0673520530145875,0.286888821570705,0.332660356546013,0,0,0,0,0,8.80138398116638,0.813792356631477,0,0,0 | |phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0.738726348460727,0.408001382488506,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,1.45990461090791,0,0.221729397462564,0.087834785693126,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0.529636723252875,1.14734648299525,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0.408308342509787,0.245668634623536,0.309977343527296,0,0.741800787835671,0,0,0,0.375355559615893,0.277064115484183,0.438977620880838,0.919463387397059,0.600952235626387,0,1.61450672119976,0.427114777637135,0.423863802319124,1.50045548042201,1.03052529238439,0.515281080091258,0.37223371266318,1.5189869901714,0.389748020644795,2.77677151668526,1.47279837827679,4.52608959092673,2.84007674013291,0.302256294682921,0.508681776931463,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,4.69348596989448,1.28648187638577,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,0,1.01346914667305,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,2.07970861530807,2.14114786556594,1.73472656537328,0.937131319941706,0,0,0,0,0.737476674166813,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.248107807818777,1.07423381301644,0.280660094433074,0.512556597022804,0,0.965123526861645,0,0.308419387605311,0.532685175939381,0.410635780069046,0,0.348631135379878,0.120859449591622,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,1.07420244868274,0.145016693914229,0.170453254832202,0.356128142586949,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0,0.471249609382746,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.633322905892992,1.97576935775941,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54736358051564,0,0,0.211125408127993,2.19172787076177,0.552567831062295,0.251932747854276,0,0,0,0,0,0,0.887790650732402,0,0,0.969332746095218,0.927680981618513,3.99227596002388,0,0,0,0,0,0,0,0.291604613383254,0.694499979733169,0,1.20596438625408,0,1.54810963903714,0.591095237907095,0.658156191461918,0,0,2.38545801361771,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,1.32686346755009,0,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0,2.36750641709634,0,1.53036380815245,2.59064976476801,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,1.83601308272048,0,0,0.640358984218058,0,0,0,0,0,0,0,0.271808412147228,0,0.407992870545287,0.288950589901519,0.600420288709789,0,0,0,0,0.837847203816763,1.83328339209347,0.717873024576814,0.798716001995964,0.429226048136571,0.446342914883745,1.41085292222125,0,0,0,0,0,0,0,1.59045937961861,1.22583065500418,0,0.137539436597234,0,0,0,2.00473536971481,0,0.315222829196793,0.944182586429966,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0.082092520749339,0.511164065356265,0.339936274560377,0,0,0.517131825446202,0.52893040697076,0,0,0.533937062838473,1.57204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.610131324509816,1.502291168478,1.14681839138014,0,0.931446044120752,0.138348634936231,0,0,0,0,0,0.434763085832475,0.74627401443437,0.934853239388898,1.66441758450784,0.947015026375446,1.25783950876288,0.889811221596536,0,0,0.310874401165561,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0.521745061811734,0.450772826991655,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0.109209638192014,0,0.425149840203366,0,0,0,0,0,0.352675943690684,0,1.02766760154335,1.41696576325585,1.59633859057151,0.82046545696302,1.00828678488687,1.59061680667701,1.13032951942296,0,0,0,0,0,1.52552838186867,0,0.596748666348824,0.451261970095544,0.20170506870352,0,0,0,0,1.2156765231311,0.781078098613847,3.30698874401895,0.887821342714695,0.546974809018219,0,0.496211178389294,0.175871244359621,0,0,0,0.606965604236632,0.682986574053893,0.443511850813194,0,0,1.08751572762931,2.56513816895111,0,0,0.706437835654626,0.628462359664008,0,1.82631744101899,0,0,1.42953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0.219881033490858,0,0.694567422971502,0.437119121007915,0,3.67722482630858,0,0,0.891139200981258,0.8453114551668,0.339854229375634,0.375935671919414,1.03132620757723,0,0,0,0,0.730336388246517,0.917458566809082,0.286679166302903,0.946629373159108,2.03974470572744,1.30905207102113,0,0,1.84870251452567,0,0,0,0,0.203977659483963,0,0,0,0.530450887527676,0.535928260312357,0,0.413731983447581,0,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,1.08858373948481,0,0.0673520530145875,0.286888821570705,0.332660356546013,0,0,0,0,0,8.80138398116638,0.813792356631477,0,0,0 | ||
|short_description=p3@CACNA1C | |||
}} | }} |
Latest revision as of 19:31, 17 September 2015
Short description: | p3@CACNA1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CACNA1C_5end |
Coexpression cluster: | C3266_uterus_aorta_smooth_colon_Olfactory_Fibroblast_dura |
Association with transcript: | -1bp_to_ENST00000335762, ENST00000399655_5end |
EntrezGene: | CACNA1C |
HGNC: | 1390 |
UniProt: | F5H522 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.77e-08 | 23 |