FFCP PHASE1:Hg19::chr19:49934646..49934653,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49934646..49934653,- | |||
|coexpression_cluster_id=C1396 | |||
|description=CAGE_peak_at_chr19:49934646..49934653,- | |description=CAGE_peak_at_chr19:49934646..49934653,- | ||
|id=chr19:49934646..49934653,- | |id=chr19:49934646..49934653,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.37e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.27e-82!22;UBERON:0001950!1.17e-78!20;UBERON:0000956!1.85e-72!25;UBERON:0000203!1.85e-72!25;UBERON:0001869!2.34e-64!32;UBERON:0001893!1.55e-60!34;UBERON:0002780!8.70e-57!41;UBERON:0001890!8.70e-57!41;UBERON:0006240!8.70e-57!41;UBERON:0003080!2.10e-55!42;UBERON:0002791!7.36e-55!33;UBERON:0002020!3.18e-53!34;UBERON:0003528!3.18e-53!34;UBERON:0000200!1.31e-51!6;UBERON:0000955!9.12e-46!69;UBERON:0006238!9.12e-46!69;UBERON:0001049!2.27e-45!57;UBERON:0005068!2.27e-45!57;UBERON:0006241!2.27e-45!57;UBERON:0007135!2.27e-45!57;UBERON:0002616!9.17e-44!59;UBERON:0001017!3.21e-38!82;UBERON:0003056!1.33e-37!61;UBERON:0005743!2.41e-36!86;UBERON:0000073!1.09e-32!94;UBERON:0001016!1.09e-32!94;UBERON:0003075!2.70e-29!86;UBERON:0007284!2.70e-29!86;UBERON:0002346!7.01e-28!90;UBERON:0001872!7.22e-28!5;UBERON:0000033!1.77e-27!123;UBERON:0002771!5.54e-27!3;UBERON:0000153!4.48e-26!129;UBERON:0007811!4.48e-26!129;UBERON:0007023!3.52e-24!115;UBERON:0001870!1.87e-18!2;UBERON:0001871!8.51e-18!7;UBERON:0004121!4.59e-17!169;UBERON:0000924!1.33e-16!173;UBERON:0006601!1.33e-16!173;UBERON:0002021!2.21e-16!5;UBERON:0000025!2.07e-11!194;UBERON:0002702!1.98e-10!1;UBERON:0002022!2.59e-10!1;UBERON:0003112!3.71e-10!1;UBERON:0000032!3.71e-10!1;UBERON:0005253!3.71e-10!1;UBERON:0003128!3.71e-10!1;UBERON:0002241!3.71e-10!1;UBERON:0001703!3.71e-10!1;UBERON:0004761!3.71e-10!1;UBERON:0009617!3.71e-10!1;UBERON:0002902!4.06e-10!1;UBERON:0009899!4.06e-10!1;UBERON:0002581!6.91e-10!1;UBERON:0007190!1.17e-09!1;UBERON:0004111!1.36e-08!241;UBERON:0000064!1.75e-08!219;UBERON:0000477!9.00e-08!286;UBERON:0000475!3.93e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;2.74e-50;2!UBERON:0000200;7.67e-18;6!UBERON:0001871;1.65e-15;6!UBERON:0000955;3.55e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,2.74e-50,2;UBERON:0000200,7.67e-18,6;UBERON:0001871,1.65e-15,6;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr19:49934646..49934653,- | |short_description=p@chr19:49934646..49934653,- | ||
}} | }} |
Latest revision as of 16:05, 27 July 2015
Short description: | p@chr19:49934646..49934653, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49934646..49934653, - |
Coexpression cluster: | C1396_brain_medial_parietal_occipital_Neurons_medulloblastoma_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 2.74e-50 | 2 |
gyrus | 7.67e-18 | 6 |
temporal lobe | 1.65e-15 | 6 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |