FFCP PHASE1:Hg19::chr12:15082007..15082016,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:15082007..15082016,-
|short_description=p6@ERP27
|description=CAGE_peak_6_at_ERP27_5end
|association_with_transcript=42bp_to_ENST00000540097_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121506 | |EntrezGene=121506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26495 | |HGNC=26495 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYS6 | |UniProt=F5GYS6 | ||
|association_with_transcript=42bp_to_ENST00000540097_5end | |||
|cluster_id=chr12:15082007..15082016,- | |||
|coexpression_cluster_id=C1663 | |||
|description=CAGE_peak_6_at_ERP27_5end | |||
|id=chr12:15082007..15082016,- | |||
|ontology_enrichment_celltype=CL:1000415!2.69e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.96e-14;3!CL:0000082;2.36e-09;19!CL:0002537;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.09e-14,3;CL:0000082,2.46e-09,19;CL:0002537,3.22e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.86e-09;5 | |||
|ontology_enrichment_disease=DOID:1749!3.06e-07!14;DOID:305!8.61e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3910;6.30e-21;2!DOID:1324;1.42e-11;15!DOID:0050615;6.45e-11;16!DOID:3908;3.35e-09;5!DOID:1325;6.21e-07;7!DOID:3904;6.21e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,6.96e-21,2;DOID:1324,1.50e-11,15;DOID:0050615,6.78e-11,16;DOID:3908,3.49e-09,5;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.11e-10!14;UBERON:0000158!1.11e-10!14;UBERON:0000305!6.76e-08!7;UBERON:0003127!4.89e-07!2;UBERON:0004871!6.68e-07!8;UBERON:0005153!6.69e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.30e-21;2!UBERON:0002173;6.30e-21;2!UBERON:0002186;6.30e-21;2!UBERON:0004821;1.96e-14;3!UBERON:0007499;1.96e-14;3!UBERON:0003215;1.96e-14;3!UBERON:0010368;1.96e-14;3!UBERON:0009911;1.96e-14;3!UBERON:0002299;1.96e-14;3!UBERON:0006524;1.96e-14;3!UBERON:0008874;1.96e-14;3!UBERON:0002169;1.96e-14;3!UBERON:0004894;1.96e-14;3!UBERON:0001052;2.53e-11;4!UBERON:0009856;3.60e-11;4!UBERON:0004802;2.36e-09;19!UBERON:0000115;2.36e-09;19!UBERON:0004907;2.53e-09;5!UBERON:0002046;2.86e-09;5!UBERON:0002048;3.27e-08;22!UBERON:0004807;3.27e-08;22!UBERON:0000117;3.27e-08;22!UBERON:0000171;3.27e-08;22!UBERON:0000170;3.27e-08;22!UBERON:0000305;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,6.96e-21,2;UBERON:0002173,6.96e-21,2;UBERON:0002186,6.96e-21,2;UBERON:0004821,2.09e-14,3;UBERON:0003215,2.09e-14,3;UBERON:0010368,2.09e-14,3;UBERON:0009911,2.09e-14,3;UBERON:0002299,2.09e-14,3;UBERON:0006524,2.09e-14,3;UBERON:0008874,2.09e-14,3;UBERON:0002169,2.09e-14,3;UBERON:0004894,2.09e-14,3;UBERON:0001052,2.53e-11,4;UBERON:0004802,2.46e-09,19;UBERON:0000115,2.46e-09,19;UBERON:0004907,2.53e-09,5;UBERON:0002046,2.74e-09,5;UBERON:0004117,2.74e-09,5;UBERON:0007689,2.74e-09,5;UBERON:0007123,2.74e-09,5;UBERON:0003091,2.74e-09,5;UBERON:0002048,3.39e-08,22;UBERON:0000117,3.39e-08,22;UBERON:0000171,3.39e-08,22;UBERON:0000170,3.39e-08,22;UBERON:0005597,3.39e-08,22;UBERON:0000118,3.39e-08,22;UBERON:0000305,6.04e-07,7 | |||
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| ||
|short_description=p6@ERP27 | |||
}} | }} |
Latest revision as of 14:09, 17 September 2015
Short description: | p6@ERP27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ERP27_5end |
Coexpression cluster: | C1663_thyroid_amniotic_rectal_lung_chorionic_kidney_serous |
Association with transcript: | 42bp_to_ENST00000540097_5end |
EntrezGene: | ERP27 |
HGNC: | 26495 |
UniProt: | F5GYS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.09e-14 | 3 |
epithelial cell of lung | 2.46e-09 | 19 |
amnion mesenchymal stem cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 6.96e-21 | 2 |
alveolar duct | 6.96e-21 | 2 |
bronchiole | 6.96e-21 | 2 |
pulmonary alveolus epithelium | 2.09e-14 | 3 |
alveolus | 2.09e-14 | 3 |
pulmonary lobule | 2.09e-14 | 3 |
lobule | 2.09e-14 | 3 |
alveolus of lung | 2.09e-14 | 3 |
alveolar system | 2.09e-14 | 3 |
pulmonary acinus | 2.09e-14 | 3 |
alveolar sac | 2.09e-14 | 3 |
alveolar wall | 2.09e-14 | 3 |
rectum | 2.53e-11 | 4 |
respiratory tract epithelium | 2.46e-09 | 19 |
lung epithelium | 2.46e-09 | 19 |
lower digestive tract | 2.53e-09 | 5 |
thyroid gland | 2.74e-09 | 5 |
pharyngeal pouch | 2.74e-09 | 5 |
thyroid diverticulum | 2.74e-09 | 5 |
pharyngeal pouch 2 | 2.74e-09 | 5 |
thyroid primordium | 2.74e-09 | 5 |
lung | 3.39e-08 | 22 |
respiratory tube | 3.39e-08 | 22 |
respiration organ | 3.39e-08 | 22 |
pair of lungs | 3.39e-08 | 22 |
lung primordium | 3.39e-08 | 22 |
lung bud | 3.39e-08 | 22 |
amnion | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 6.96e-21 | 2 |
lung cancer | 1.50e-11 | 15 |
respiratory system cancer | 6.78e-11 | 16 |
non-small cell lung carcinoma | 3.49e-09 | 5 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |