FFCP PHASE1:Hg19::chr3:133614461..133614462,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51560 | |EntrezGene=51560 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14902 | |HGNC=14902 | ||
|TSSclassifier=strong | |||
|UniProt=C9J0I2 | |UniProt=C9J0I2 | ||
|association_with_transcript=14bp_to_ENST00000469959_5end | |association_with_transcript=14bp_to_ENST00000469959_5end | ||
|cluster_id=chr3:133614461..133614462,- | |||
|description=CAGE_peak_16_at_RAB6B_5end | |description=CAGE_peak_16_at_RAB6B_5end | ||
|id=chr3:133614461..133614462,- | |id=chr3:133614461..133614462,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002188;3.10e-11;5!CL:1000746;2.11e-08;7!CL:1000612;2.11e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.26e-11,5;CL:1000746,2.18e-08,7;CL:1000612,2.18e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.82e-37!57;UBERON:0005068!2.82e-37!57;UBERON:0006241!2.82e-37!57;UBERON:0007135!2.82e-37!57;UBERON:0002616!2.26e-33!59;UBERON:0003075!6.97e-32!86;UBERON:0007284!6.97e-32!86;UBERON:0001017!2.14e-31!82;UBERON:0005743!2.21e-31!86;UBERON:0007023!2.34e-30!115;UBERON:0002346!5.60e-30!90;UBERON:0000073!5.48e-29!94;UBERON:0001016!5.48e-29!94;UBERON:0000955!1.71e-28!69;UBERON:0006238!1.71e-28!69;UBERON:0003080!2.83e-26!42;UBERON:0002020!1.35e-25!34;UBERON:0003528!1.35e-25!34;UBERON:0001893!2.88e-25!34;UBERON:0002780!1.80e-24!41;UBERON:0001890!1.80e-24!41;UBERON:0006240!1.80e-24!41;UBERON:0002791!1.99e-23!33;UBERON:0001869!4.47e-22!32;UBERON:0002619!8.61e-21!22;UBERON:0001950!6.29e-20!20;UBERON:0002298!1.29e-19!8;UBERON:0000956!6.54e-18!25;UBERON:0000203!6.54e-18!25;UBERON:0003056!9.75e-18!61;UBERON:0004121!3.83e-16!169;UBERON:0000924!1.67e-15!173;UBERON:0006601!1.67e-15!173;UBERON:0000033!1.87e-15!123;UBERON:0000153!2.68e-14!129;UBERON:0007811!2.68e-14!129;UBERON:0003076!5.22e-12!15;UBERON:0003057!5.22e-12!15;UBERON:0001871!5.72e-10!7;UBERON:0000200!1.02e-09!6;UBERON:0004733!1.84e-09!12;UBERON:0002028!1.84e-09!12;UBERON:0007277!1.84e-09!12;UBERON:0002308!3.18e-09!9;UBERON:0000125!3.18e-09!9;UBERON:0001872!8.32e-09!5;UBERON:0000988!1.01e-08!3;UBERON:0004732!1.22e-08!13;UBERON:0000025!1.78e-08!194;UBERON:0006331!2.70e-08!3;UBERON:0001896!3.35e-08!3;UBERON:0005290!3.35e-08!3;UBERON:0010096!3.35e-08!3;UBERON:0004111!9.87e-08!241;UBERON:0002369!1.90e-07!3;UBERON:0001235!1.90e-07!3;UBERON:0006858!1.90e-07!3;UBERON:0002771!2.49e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;6.30e-26;2!UBERON:0006331;6.30e-26;2!UBERON:0009662;6.30e-26;2!UBERON:0000988;8.69e-18;3!UBERON:0001872;3.10e-11;5!UBERON:0002298;1.38e-09;6!UBERON:0000074;2.11e-08;7!UBERON:0001229;2.11e-08;7!UBERON:0002680;8.14e-07;9!UBERON:0000125;8.14e-07;9!UBERON:0002308;8.14e-07;9!UBERON:0001895;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,9.18e-26,2;UBERON:0006331,9.18e-26,2;UBERON:0009662,9.18e-26,2;UBERON:0000988,1.12e-17,3;UBERON:0001872,2.66e-11,5;UBERON:0002298,1.57e-09,6;UBERON:0010532,2.18e-08,7;UBERON:0000074,2.18e-08,7;UBERON:0001229,2.18e-08,7;UBERON:0001230,2.18e-08,7;UBERON:0003220,2.18e-08,7;UBERON:0005749,2.18e-08,7;UBERON:0004199,2.18e-08,7;UBERON:0004209,2.18e-08,7;UBERON:0004198,2.18e-08,7;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9;UBERON:0002680,8.85e-07,9;UBERON:0000125,8.85e-07,9;UBERON:0002308,8.85e-07,9;UBERON:0001895,8.85e-07,9;UBERON:0010092,8.85e-07,9 | |||
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| ||
|short_description=p16@RAB6B | |short_description=p16@RAB6B | ||
}} | }} |
Latest revision as of 21:59, 24 September 2015
Short description: | p16@RAB6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RAB6B_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000469959_5end |
EntrezGene: | RAB6B |
HGNC: | 14902 |
UniProt: | C9J0I2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.26e-11 | 5 |
glomerular cell | 2.18e-08 | 7 |
kidney corpuscule cell | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 9.18e-26 | 2 |
brainstem nucleus | 9.18e-26 | 2 |
hindbrain nucleus | 9.18e-26 | 2 |
pons | 1.12e-17 | 3 |
parietal lobe | 2.66e-11 | 5 |
brainstem | 1.57e-09 | 6 |
primitive nephron | 2.18e-08 | 7 |
renal glomerulus | 2.18e-08 | 7 |
renal corpuscle | 2.18e-08 | 7 |
glomerular capsule | 2.18e-08 | 7 |
metanephric mesenchyme | 2.18e-08 | 7 |
glomerular tuft | 2.18e-08 | 7 |
S-shaped body | 2.18e-08 | 7 |
renal vesicle | 2.18e-08 | 7 |
comma-shaped body | 2.18e-08 | 7 |
mesonephric epithelium | 1.69e-07 | 8 |
mesonephric tubule | 1.69e-07 | 8 |
nephric duct | 1.69e-07 | 8 |
renal duct | 1.69e-07 | 8 |
mesonephric duct | 1.69e-07 | 8 |
pronephric duct | 1.69e-07 | 8 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |
regional part of metencephalon | 8.85e-07 | 9 |
neural nucleus | 8.85e-07 | 9 |
nucleus of brain | 8.85e-07 | 9 |
metencephalon | 8.85e-07 | 9 |
future metencephalon | 8.85e-07 | 9 |