FFCP PHASE1:Hg19::chr3:132379099..132379143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84129 | |EntrezGene=84129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30211 | |HGNC=30211 | ||
|TSSclassifier=strong | |||
|UniProt=Q709F0 | |UniProt=Q709F0 | ||
|association_with_transcript=-124bp_to_ENST00000355458,NM_032169,uc003eov.3,uc003eoy.2_5end | |association_with_transcript=-124bp_to_ENST00000355458,NM_032169,uc003eov.3,uc003eoy.2_5end | ||
|cluster_id=chr3:132379099..132379143,- | |||
|description=CAGE_peak_4_at_ACAD11_5end | |description=CAGE_peak_4_at_ACAD11_5end | ||
|id=chr3:132379099..132379143,- | |id=chr3:132379099..132379143,- | ||
|ontology_enrichment_celltype=CL:0000542!4.38e-09!53;CL:0000051!4.38e-09!53;CL:0000838!8.98e-09!52;CL:0000791!9.35e-07!18;CL:0000789!9.35e-07!18;CL:0002420!9.35e-07!18;CL:0002419!9.35e-07!18;CL:0000790!9.35e-07!18 | |ontology_enrichment_celltype=CL:0000542!4.38e-09!53;CL:0000051!4.38e-09!53;CL:0000838!8.98e-09!52;CL:0000791!9.35e-07!18;CL:0000789!9.35e-07!18;CL:0002420!9.35e-07!18;CL:0002419!9.35e-07!18;CL:0000790!9.35e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000625;8.66e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.30e-09,53;CL:0000051,2.30e-09,53;CL:0000838,5.15e-09,52;CL:0000625,4.05e-07,11;CL:0000791,7.94e-07,18;CL:0000789,7.94e-07,18;CL:0002420,7.94e-07,18;CL:0002419,7.94e-07,18;CL:0000790,7.94e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-22!115;UBERON:0001049!1.18e-14!57;UBERON:0005068!1.18e-14!57;UBERON:0006241!1.18e-14!57;UBERON:0007135!1.18e-14!57;UBERON:0002780!3.21e-12!41;UBERON:0001890!3.21e-12!41;UBERON:0006240!3.21e-12!41;UBERON:0003080!7.37e-12!42;UBERON:0002616!9.90e-12!59;UBERON:0000955!1.12e-10!69;UBERON:0006238!1.12e-10!69;UBERON:0001893!1.20e-10!34;UBERON:0002791!1.59e-10!33;UBERON:0002020!1.60e-10!34;UBERON:0003528!1.60e-10!34;UBERON:0001869!1.46e-09!32;UBERON:0000153!2.48e-09!129;UBERON:0007811!2.48e-09!129;UBERON:0002619!7.62e-09!22;UBERON:0001017!1.70e-08!82;UBERON:0000073!2.21e-08!94;UBERON:0001016!2.21e-08!94;UBERON:0000033!3.13e-08!123;UBERON:0005743!3.67e-08!86;UBERON:0001950!5.81e-08!20;UBERON:0002346!6.56e-08!90;UBERON:0003075!9.73e-08!86;UBERON:0007284!9.73e-08!86;UBERON:0000956!2.89e-07!25;UBERON:0000203!2.89e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.96e-10;41!UBERON:0001890;4.96e-10;41!UBERON:0002619;1.84e-09;22!UBERON:0003528;3.04e-09;34!UBERON:0002020;3.04e-09;34!UBERON:0000073;3.15e-09;53!UBERON:0002616;3.15e-09;53!UBERON:0002791;3.30e-09;32!UBERON:0001893;4.49e-09;34!UBERON:0001869;1.04e-08;32!UBERON:0001950;1.75e-08;20!UBERON:0000956;2.59e-07;25!UBERON:0000203;2.59e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.53e-22,114;UBERON:0001049,2.09e-17,56;UBERON:0005068,2.09e-17,56;UBERON:0006241,2.09e-17,56;UBERON:0007135,2.09e-17,56;UBERON:0000073,1.23e-15,53;UBERON:0002616,1.23e-15,53;UBERON:0002780,7.53e-14,41;UBERON:0001890,7.53e-14,41;UBERON:0003080,7.53e-14,41;UBERON:0006240,7.53e-14,41;UBERON:0001893,5.04e-12,34;UBERON:0003528,7.06e-12,34;UBERON:0002020,7.06e-12,34;UBERON:0000955,7.84e-12,68;UBERON:0006238,7.84e-12,68;UBERON:0002791,2.67e-11,32;UBERON:0001869,9.13e-11,32;UBERON:0002619,2.01e-10,22;UBERON:0001017,2.97e-10,81;UBERON:0001016,8.75e-10,89;UBERON:0001950,2.15e-09,20;UBERON:0002346,2.21e-09,86;UBERON:0003075,3.63e-09,82;UBERON:0007284,3.63e-09,82;UBERON:0000956,4.16e-08,25;UBERON:0000203,4.16e-08,25;UBERON:0010371,5.47e-07,104;UBERON:0003056,7.26e-07,61 | |||
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| ||
|short_description=p4@ACAD11 | |short_description=p4@ACAD11 | ||
}} | }} |
Latest revision as of 20:35, 24 September 2015
Short description: | p4@ACAD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACAD11_5end |
Coexpression cluster: | NA |
Association with transcript: | -124bp_to_ENST00000355458, NM_032169, uc003eov.3, uc003eoy.2_5end |
EntrezGene: | ACAD11 |
HGNC: | 30211 |
UniProt: | Q709F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.30e-09 | 53 |
common lymphoid progenitor | 2.30e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.15e-09 | 52 |
CD8-positive, alpha-beta T cell | 4.05e-07 | 11 |
mature alpha-beta T cell | 7.94e-07 | 18 |
alpha-beta T cell | 7.94e-07 | 18 |
immature T cell | 7.94e-07 | 18 |
mature T cell | 7.94e-07 | 18 |
immature alpha-beta T cell | 7.94e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.53e-22 | 114 |
neural tube | 2.09e-17 | 56 |
neural rod | 2.09e-17 | 56 |
future spinal cord | 2.09e-17 | 56 |
neural keel | 2.09e-17 | 56 |
regional part of nervous system | 1.23e-15 | 53 |
regional part of brain | 1.23e-15 | 53 |
regional part of forebrain | 7.53e-14 | 41 |
forebrain | 7.53e-14 | 41 |
anterior neural tube | 7.53e-14 | 41 |
future forebrain | 7.53e-14 | 41 |
telencephalon | 5.04e-12 | 34 |
brain grey matter | 7.06e-12 | 34 |
gray matter | 7.06e-12 | 34 |
brain | 7.84e-12 | 68 |
future brain | 7.84e-12 | 68 |
regional part of telencephalon | 2.67e-11 | 32 |
cerebral hemisphere | 9.13e-11 | 32 |
regional part of cerebral cortex | 2.01e-10 | 22 |
central nervous system | 2.97e-10 | 81 |
nervous system | 8.75e-10 | 89 |
neocortex | 2.15e-09 | 20 |
neurectoderm | 2.21e-09 | 86 |
neural plate | 3.63e-09 | 82 |
presumptive neural plate | 3.63e-09 | 82 |
cerebral cortex | 4.16e-08 | 25 |
pallium | 4.16e-08 | 25 |
ecto-epithelium | 5.47e-07 | 104 |
pre-chordal neural plate | 7.26e-07 | 61 |