FFCP PHASE1:Hg19::chr19:45205949..45205998,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45205949..45205998,- | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_at_chr19:45205949..45205998,- | |description=CAGE_peak_at_chr19:45205949..45205998,- | ||
|id=chr19:45205949..45205998,- | |id=chr19:45205949..45205998,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.59e-12;3!CL:0002149;8.48e-07;6!CL:0002255;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.59e-12,3;CL:0002149,8.97e-07,6;CL:0002255,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006298;5.05e-34;1!UBERON:0008801;5.05e-34;1 | |||
|ontology_enrichment_disease=DOID:0050619!7.40e-11!1;DOID:1357!7.40e-11!1 | |ontology_enrichment_disease=DOID:0050619!7.40e-11!1;DOID:1357!7.40e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;5.05e-34;1!DOID:1357;5.05e-34;1!DOID:3493;9.07e-18;2!DOID:3001;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.58e-34,1;DOID:1357,2.58e-34,1;DOID:3493,9.07e-18,2;DOID:3001,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003408!7.35e-23!10;UBERON:0001829!9.38e-20!2;UBERON:0001044!1.45e-14!6;UBERON:0003293!1.45e-14!6;UBERON:0003294!1.45e-14!6;UBERON:0010047!1.45e-14!6;UBERON:0000167!1.45e-14!6;UBERON:0000078!1.18e-12!18;UBERON:0004177!4.29e-12!7;UBERON:0001764!7.40e-11!1;UBERON:0001825!7.40e-11!1;UBERON:0001736!8.14e-11!1;UBERON:0006298!8.14e-11!1;UBERON:0001831!1.08e-10!1;UBERON:0001567!1.08e-10!1;UBERON:0008801!1.08e-10!1;UBERON:0002372!1.73e-10!1;UBERON:0001961!1.73e-10!1;UBERON:0001744!1.73e-10!1;UBERON:0001735!1.73e-10!1;UBERON:0002022!4.75e-10!1;UBERON:0002370!5.46e-10!4;UBERON:0005058!5.46e-10!4;UBERON:0009113!5.46e-10!4;UBERON:0003295!5.46e-10!4;UBERON:0005562!5.46e-10!4;UBERON:0001042!9.97e-09!10;UBERON:0009145!9.97e-09!10;UBERON:0000974!1.11e-08!10;UBERON:0000165!4.44e-08!28;UBERON:0000930!4.44e-08!28;UBERON:0006562!5.60e-08!11;UBERON:0000166!2.96e-07!21;UBERON:0003351!6.11e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.96e-66;2!UBERON:0001831;5.05e-34;1!UBERON:0001736;5.05e-34;1!UBERON:0001764;5.05e-34;1!UBERON:0001825;5.05e-34;1!UBERON:0001567;5.05e-34;1!UBERON:0001044;6.78e-23;6!UBERON:0003293;6.78e-23;6!UBERON:0003294;6.78e-23;6!UBERON:0010047;6.78e-23;6!UBERON:0003408;6.78e-23;6!UBERON:0000167;6.78e-23;6!UBERON:0001041;7.17e-22;14!UBERON:0004089;9.07e-18;2!UBERON:0004921;1.58e-08;33!UBERON:0000161;6.15e-08;19!UBERON:0000166;6.15e-08;19!UBERON:0000945;6.55e-08;5!UBERON:0010039;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.53e-66,2;UBERON:0001764,2.58e-34,1;UBERON:0001825,2.58e-34,1;UBERON:0001736,3.61e-34,1;UBERON:0006298,3.61e-34,1;UBERON:0001831,9.85e-34,1;UBERON:0001567,9.85e-34,1;UBERON:0008801,9.85e-34,1;UBERON:0001044,7.58e-23,6;UBERON:0003293,7.58e-23,6;UBERON:0003294,7.58e-23,6;UBERON:0010047,7.58e-23,6;UBERON:0000167,7.58e-23,6;UBERON:0004089,1.27e-17,2;UBERON:0003408,3.71e-14,10;UBERON:0000166,5.74e-07,22 | |||
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|short_description=p@chr19:45205949..45205998,- | |short_description=p@chr19:45205949..45205998,- | ||
}} | }} |
Latest revision as of 14:41, 27 July 2015
Short description: | p@chr19:45205949..45205998, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45205949..45205998, - |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.59e-12 | 3 |
epithelial cell of uterus | 8.97e-07 | 6 |
stromal cell of endometrium | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.53e-66 | 2 |
maxillary sinus | 2.58e-34 | 1 |
paranasal sinus | 2.58e-34 | 1 |
submandibular gland | 3.61e-34 | 1 |
submandibular gland primordium | 3.61e-34 | 1 |
parotid gland | 9.85e-34 | 1 |
cheek | 9.85e-34 | 1 |
parotid gland primordium | 9.85e-34 | 1 |
saliva-secreting gland | 7.58e-23 | 6 |
gland of oral region | 7.58e-23 | 6 |
gland of foregut | 7.58e-23 | 6 |
oral gland | 7.58e-23 | 6 |
oral cavity | 7.58e-23 | 6 |
midface | 1.27e-17 | 2 |
gland of gut | 3.71e-14 | 10 |
oral opening | 5.74e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.58e-34 | 1 |
maxillary sinus cancer | 2.58e-34 | 1 |
signet ring cell adenocarcinoma | 9.07e-18 | 2 |
female reproductive endometrioid cancer | 8.97e-07 | 6 |