FFCP PHASE1:Hg19::chr19:4279360..4279365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56961 | |EntrezGene=56961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30633 | |HGNC=30633 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IW2 | |UniProt=Q96IW2 | ||
|association_with_transcript=-293bp_to_AK055673_5end | |association_with_transcript=-293bp_to_AK055673_5end | ||
|cluster_id=chr19:4279360..4279365,+ | |||
|coexpression_cluster_id=C1241 | |||
|description=CAGE_peak_16_at_SHD_5end | |description=CAGE_peak_16_at_SHD_5end | ||
|id=chr19:4279360..4279365,+ | |id=chr19:4279360..4279365,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.49e-12!9;CL:0000784!1.41e-10!3 | |ontology_enrichment_celltype=CL:0000188!1.49e-12!9;CL:0000784!1.41e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.18e-38;3!CL:0002575;1.91e-15;2!CL:0000451;2.83e-11;10!CL:0000669;2.18e-08;4!CL:0000333;4.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.67e-38,3;CL:0002575,1.78e-15,2;CL:0000451,3.48e-11,10;CL:0000669,2.11e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!3.14e-11!6;DOID:9119!2.17e-08!1;DOID:171!6.44e-07!10 | |ontology_enrichment_disease=DOID:169!3.14e-11!6;DOID:9119!2.17e-08!1;DOID:171!6.44e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000013!2.26e-13!5;UBERON:0002410!2.26e-13!5;UBERON:0001049!5.01e-08!57;UBERON:0005068!5.01e-08!57;UBERON:0006241!5.01e-08!57;UBERON:0007135!5.01e-08!57;UBERON:0000073!6.30e-08!94;UBERON:0001016!6.30e-08!94;UBERON:0002022!7.16e-08!1;UBERON:0002616!1.03e-07!59;UBERON:0000010!1.22e-07!8;UBERON:0002619!3.28e-07!22 | |ontology_enrichment_uberon=UBERON:0000013!2.26e-13!5;UBERON:0002410!2.26e-13!5;UBERON:0001049!5.01e-08!57;UBERON:0005068!5.01e-08!57;UBERON:0006241!5.01e-08!57;UBERON:0007135!5.01e-08!57;UBERON:0000073!6.30e-08!94;UBERON:0001016!6.30e-08!94;UBERON:0002022!7.16e-08!1;UBERON:0002616!1.03e-07!59;UBERON:0000010!1.22e-07!8;UBERON:0002619!3.28e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.79e-07;5!UBERON:0002410;4.79e-07;5!UBERON:0002021;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.79e-07,5;UBERON:0002410,4.79e-07,5;UBERON:0002021,5.38e-07,5 | |||
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|short_description=p16@SHD | |short_description=p16@SHD | ||
}} | }} |
Latest revision as of 08:39, 18 September 2015
Short description: | p16@SHD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SHD_5end |
Coexpression cluster: | C1241_neuroblastoma_small_Skeletal_Dendritic_Pericytes_merkel_mesenchymal |
Association with transcript: | -293bp_to_AK055673_5end |
EntrezGene: | SHD |
HGNC: | 30633 |
UniProt: | Q96IW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.67e-38 | 3 |
central nervous system pericyte | 1.78e-15 | 2 |
dendritic cell | 3.48e-11 | 10 |
pericyte cell | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.79e-07 | 5 |
autonomic nervous system | 4.79e-07 | 5 |
occipital lobe | 5.38e-07 | 5 |