FFCP PHASE1:Hg19::chr3:12190006..12190011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6854 | |EntrezGene=6854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11495 | |HGNC=11495 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000439861,uc003bwn.2_5end | |association_with_transcript=-45bp_to_ENST00000439861,uc003bwn.2_5end | ||
|cluster_id=chr3:12190006..12190011,+ | |||
|coexpression_cluster_id=C173 | |||
|description=CAGE_peak_19_at_SYN2_5end | |description=CAGE_peak_19_at_SYN2_5end | ||
|id=chr3:12190006..12190011,+ | |id=chr3:12190006..12190011,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.75e-38!15;CL:0002521!3.61e-23!3;CL:0000325!6.01e-14!39 | |ontology_enrichment_celltype=CL:0000136!1.75e-38!15;CL:0002521!3.61e-23!3;CL:0000325!6.01e-14!39 | ||
|ontology_enrichment_celltype_v019=CL:0002521;1.97e-84;3!CL:0000136;2.77e-54;13!CL:0002617;1.15e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,1.28e-84,3;CL:0000136,3.90e-47,15;CL:0002617,1.15e-15,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!1.94e-15!2;DOID:178!2.13e-08!1;DOID:326!2.13e-08!1;DOID:3978!2.13e-08!1;DOID:3394!2.13e-08!1;DOID:5844!2.13e-08!1;DOID:1287!3.67e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002190!3.61e-23!3;UBERON:0002072!3.93e-14!5;UBERON:0007023!1.95e-09!115;UBERON:0006122!7.56e-09!1;UBERON:0001013!8.86e-09!14;UBERON:0005418!1.10e-08!1;UBERON:0001389!1.10e-08!1;UBERON:0000026!1.10e-08!1;UBERON:0008784!1.10e-08!1;UBERON:0006058!1.10e-08!1;UBERON:0003663!1.10e-08!1;UBERON:0001383!1.10e-08!1;UBERON:0004256!1.10e-08!1;UBERON:0002529!1.10e-08!1;UBERON:0004708!1.10e-08!1;UBERON:0002101!1.10e-08!1;UBERON:0004709!1.10e-08!1;UBERON:0003661!1.10e-08!1;UBERON:0002471!1.10e-08!1;UBERON:0004357!1.10e-08!1;UBERON:0009872!1.10e-08!1;UBERON:0004347!1.10e-08!1;UBERON:0005420!1.10e-08!1;UBERON:0005732!1.10e-08!1;UBERON:0006057!1.10e-08!1;UBERON:0000978!1.10e-08!1;UBERON:0002103!1.10e-08!1;UBERON:0001665!1.10e-08!1;UBERON:0003823!1.10e-08!1;UBERON:0000154!1.10e-08!1;UBERON:0005733!1.10e-08!1;UBERON:0005730!1.10e-08!1;UBERON:0007029!1.37e-08!1;UBERON:0002363!4.07e-08!1;UBERON:0007647!4.07e-08!1;UBERON:0010115!4.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.97e-84;3!UBERON:0002072;4.20e-51;5!UBERON:0001013;1.14e-32;14!UBERON:0000310;2.31e-12;10!UBERON:0001443;2.48e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.28e-84,3;UBERON:0002072,3.24e-51,5;UBERON:0001013,1.05e-32,14;UBERON:0000310,2.24e-12,10;UBERON:0001443,2.42e-11,11 | |||
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|short_description=p19@SYN2 | |short_description=p19@SYN2 | ||
}} | }} |
Latest revision as of 23:22, 19 September 2015
Short description: | p19@SYN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SYN2_5end |
Coexpression cluster: | C173_Adipocyte_mature_skin_left_Hepatocyte_Osteoblast_adipose |
Association with transcript: | -45bp_to_ENST00000439861, uc003bwn.2_5end |
EntrezGene: | SYN2 |
HGNC: | 11495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 1.28e-84 | 3 |
fat cell | 3.90e-47 | 15 |
adipocyte of breast | 1.15e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.28e-84 | 3 |
hypodermis | 3.24e-51 | 5 |
adipose tissue | 1.05e-32 | 14 |
breast | 2.24e-12 | 10 |
chest | 2.42e-11 | 11 |