FFCP PHASE1:Hg19::chr3:114012855..114012862,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201633 | |EntrezGene=201633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26838 | |HGNC=26838 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000485814_5end | |association_with_transcript=-12bp_to_ENST00000485814_5end | ||
|cluster_id=chr3:114012855..114012862,+ | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_5_at_TIGIT_5end | |description=CAGE_peak_5_at_TIGIT_5end | ||
|id=chr3:114012855..114012862,+ | |id=chr3:114012855..114012862,+ | ||
|ontology_enrichment_celltype=CL:0000791!9.64e-34!18;CL:0000789!9.64e-34!18;CL:0002420!9.64e-34!18;CL:0002419!9.64e-34!18;CL:0000790!9.64e-34!18;CL:0000084!4.63e-27!25;CL:0000827!4.63e-27!25;CL:0000625!7.92e-24!11;CL:0000838!2.04e-14!52;CL:0000542!4.59e-14!53;CL:0000051!4.59e-14!53;CL:0000898!3.43e-11!3;CL:0000624!3.38e-09!6;CL:0000815!5.93e-08!2;CL:0000792!5.93e-08!2;CL:0002677!5.93e-08!2;CL:0000893!1.20e-07!2;CL:0002489!1.20e-07!2;CL:0000809!1.20e-07!2;CL:0000808!1.20e-07!2;CL:0000894!1.20e-07!2;CL:0000806!1.20e-07!2;CL:0000807!1.20e-07!2;CL:0000805!1.20e-07!2;CL:0002425!1.20e-07!2 | |ontology_enrichment_celltype=CL:0000791!9.64e-34!18;CL:0000789!9.64e-34!18;CL:0002420!9.64e-34!18;CL:0002419!9.64e-34!18;CL:0000790!9.64e-34!18;CL:0000084!4.63e-27!25;CL:0000827!4.63e-27!25;CL:0000625!7.92e-24!11;CL:0000838!2.04e-14!52;CL:0000542!4.59e-14!53;CL:0000051!4.59e-14!53;CL:0000898!3.43e-11!3;CL:0000624!3.38e-09!6;CL:0000815!5.93e-08!2;CL:0000792!5.93e-08!2;CL:0002677!5.93e-08!2;CL:0000893!1.20e-07!2;CL:0002489!1.20e-07!2;CL:0000809!1.20e-07!2;CL:0000808!1.20e-07!2;CL:0000894!1.20e-07!2;CL:0000806!1.20e-07!2;CL:0000807!1.20e-07!2;CL:0000805!1.20e-07!2;CL:0002425!1.20e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.33e-26;18!CL:0000789;2.33e-26;18!CL:0002419;2.33e-26;18!CL:0000084;1.51e-24;25!CL:0000625;2.40e-22;11!CL:0000898;1.62e-14;3!CL:0000895;2.18e-11;1!CL:0000624;1.06e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.00e-26,18;CL:0000789,2.00e-26,18;CL:0002420,2.00e-26,18;CL:0002419,2.00e-26,18;CL:0000790,2.00e-26,18;CL:0000084,1.35e-24,25;CL:0000827,1.35e-24,25;CL:0000625,1.92e-22,11;CL:0000898,1.73e-14,3;CL:0000838,2.36e-11,52;CL:0000810,2.42e-11,1;CL:0000895,2.42e-11,1;CL:0002436,2.42e-11,1;CL:0002427,2.42e-11,1;CL:0002428,2.42e-11,1;CL:0002429,2.42e-11,1;CL:0002433,2.42e-11,1;CL:0002431,2.42e-11,1;CL:0002432,2.42e-11,1;CL:0000542,4.03e-11,53;CL:0000051,4.03e-11,53;CL:0000624,1.09e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.33e-26;18!CL:0002427;2.18e-11;1!UBERON:0001045;4.22e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.81e-16!15;UBERON:0000179!3.81e-16!15;UBERON:0000463!3.81e-16!15;UBERON:0004177!1.87e-15!7;UBERON:0002370!4.66e-13!4;UBERON:0005058!4.66e-13!4;UBERON:0009113!4.66e-13!4;UBERON:0003295!4.66e-13!4;UBERON:0005562!4.66e-13!4;UBERON:0001042!5.72e-11!10;UBERON:0009145!5.72e-11!10;UBERON:0006562!6.54e-10!11;UBERON:0003351!1.01e-08!6;UBERON:0003408!8.67e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.22e-11;1!UBERON:0001153;4.22e-11;1!UBERON:0009854;4.22e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.43e-11,1;UBERON:0001153,5.43e-11,1;UBERON:0001045,5.43e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,1.00311897234407,0.651844533267181,2.8406868344084,5.84480185223734,1.33692548262208,4.12448270464772,5.09527957542329,4.33286182024025,0.768547918354051,2.08094956095805,0.328875809207352,0.552700035571697,0,0,0,0,0.453237370790265,2.29932296161153,4.12352934579156,0.759059076058509,1.59282707162048,3.90650072313851,0.950452044448374,0.903450714466637,1.66382594500744,2.49861453104692,0.710331756132051,1.64225599384209,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,1.94541993357815,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6804229599104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.248298857183432,0,0,0,0.217716747896961,0,0.875576689189638,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,1.00311897234407,0.651844533267181,2.8406868344084,5.84480185223734,1.33692548262208,4.12448270464772,5.09527957542329,4.33286182024025,0.768547918354051,2.08094956095805,0.328875809207352,0.552700035571697,0,0,0,0,0.453237370790265,2.29932296161153,4.12352934579156,0.759059076058509,1.59282707162048,3.90650072313851,0.950452044448374,0.903450714466637,1.66382594500744,2.49861453104692,0.710331756132051,1.64225599384209,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,1.94541993357815,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6804229599104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.248298857183432,0,0,0,0.217716747896961,0,0.875576689189638,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p5@TIGIT | |short_description=p5@TIGIT | ||
}} | }} |
Latest revision as of 16:39, 19 September 2015
Short description: | p5@TIGIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TIGIT_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | -12bp_to_ENST00000485814_5end |
EntrezGene: | TIGIT |
HGNC: | 26838 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.00e-26 | 18 |
alpha-beta T cell | 2.00e-26 | 18 |
immature T cell | 2.00e-26 | 18 |
mature T cell | 2.00e-26 | 18 |
immature alpha-beta T cell | 2.00e-26 | 18 |
T cell | 1.35e-24 | 25 |
pro-T cell | 1.35e-24 | 25 |
CD8-positive, alpha-beta T cell | 1.92e-22 | 11 |
naive T cell | 1.73e-14 | 3 |
lymphoid lineage restricted progenitor cell | 2.36e-11 | 52 |
CD4-positive, alpha-beta thymocyte | 2.42e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.42e-11 | 1 |
mature CD4 single-positive thymocyte | 2.42e-11 | 1 |
resting double-positive thymocyte | 2.42e-11 | 1 |
double-positive blast | 2.42e-11 | 1 |
CD69-positive double-positive thymocyte | 2.42e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.42e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.42e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.42e-11 | 1 |
lymphocyte | 4.03e-11 | 53 |
common lymphoid progenitor | 4.03e-11 | 53 |
CD4-positive, alpha-beta T cell | 1.09e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.43e-11 | 1 |
caecum | 5.43e-11 | 1 |
midgut | 5.43e-11 | 1 |