FFCP PHASE1:Hg19::chr19:40772148..40772157,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=208 | |EntrezGene=208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=392 | |HGNC=392 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_ENST00000492463_5end | |association_with_transcript=66bp_to_ENST00000492463_5end | ||
|cluster_id=chr19:40772148..40772157,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_27_at_AKT2_5end | |description=CAGE_peak_27_at_AKT2_5end | ||
|id=chr19:40772148..40772157,- | |id=chr19:40772148..40772157,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.96e-34;3!UBERON:0007123;4.21e-21;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.60e-31!2;UBERON:0000989!8.86e-17!1;UBERON:0008811!8.86e-17!1;UBERON:0006258!8.86e-17!1;UBERON:0005876!8.86e-17!1;UBERON:0004874!8.86e-17!1;UBERON:0001000!1.21e-16!1;UBERON:0005352!1.21e-16!1;UBERON:0002046!1.85e-13!5;UBERON:0004117!1.85e-13!5;UBERON:0007689!1.85e-13!5;UBERON:0007123!1.85e-13!5;UBERON:0003091!1.85e-13!5;UBERON:0003135!4.47e-13!11;UBERON:0002037!3.06e-11!6;UBERON:0006215!3.06e-11!6;UBERON:0007023!5.98e-10!115;UBERON:0003127!5.94e-09!2;UBERON:0002680!8.60e-08!9;UBERON:0001895!8.60e-08!9;UBERON:0010092!8.60e-08!9;UBERON:0000974!4.52e-07!10;UBERON:0003101!8.10e-07!22;UBERON:0000079!8.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.21e-21;5!UBERON:0002037;9.07e-18;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.21e-21,5;UBERON:0004117,4.21e-21,5;UBERON:0007689,4.21e-21,5;UBERON:0007123,4.21e-21,5;UBERON:0003091,4.21e-21,5;UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15;UBERON:0008814,7.18e-07,18 | |||
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|short_description=p27@AKT2 | |short_description=p27@AKT2 | ||
}} | }} |
Latest revision as of 01:27, 18 September 2015
Short description: | p27@AKT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_AKT2_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 66bp_to_ENST00000492463_5end |
EntrezGene: | AKT2 |
HGNC: | 392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.21e-21 | 5 |
pharyngeal pouch | 4.21e-21 | 5 |
thyroid diverticulum | 4.21e-21 | 5 |
pharyngeal pouch 2 | 4.21e-21 | 5 |
thyroid primordium | 4.21e-21 | 5 |
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
pharyngeal arch system | 7.18e-07 | 18 |