FFCP PHASE1:Hg19::chr3:11079240..11079242,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6529 | |EntrezGene=6529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11042 | |HGNC=11042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=299bp_to_AK090958_5end | |association_with_transcript=299bp_to_AK090958_5end | ||
|cluster_id=chr3:11079240..11079242,+ | |||
|coexpression_cluster_id=C4263 | |||
|description=CAGE_peak_6_at_SLC6A1_5end | |description=CAGE_peak_6_at_SLC6A1_5end | ||
|id=chr3:11079240..11079242,+ | |id=chr3:11079240..11079242,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.47e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002771;5.04e-34;2!UBERON:0002021;1.60e-14;5!UBERON:0001950;1.09e-13;20!UBERON:0002619;1.33e-12;22!UBERON:0000200;2.45e-12;6!UBERON:0000956;2.77e-11;25!UBERON:0000203;2.77e-11;25!UBERON:0001871;8.99e-11;6!UBERON:0002791;2.79e-09;32!UBERON:0001869;2.79e-09;32!UBERON:0001893;1.25e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,5.04e-34,2;UBERON:0002021,1.40e-14,5;UBERON:0001950,1.02e-13,20;UBERON:0002619,1.25e-12,22;UBERON:0000200,2.45e-12,6;UBERON:0000956,2.63e-11,25;UBERON:0000203,2.63e-11,25;UBERON:0001871,8.99e-11,6;UBERON:0002791,3.79e-09,32;UBERON:0001869,3.79e-09,32;UBERON:0003528,1.09e-08,34;UBERON:0002020,1.09e-08,34;UBERON:0001893,1.09e-08,34;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41 | |||
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|short_description=p6@SLC6A1 | |short_description=p6@SLC6A1 | ||
}} | }} |
Latest revision as of 12:23, 19 September 2015
Short description: | p6@SLC6A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC6A1_5end |
Coexpression cluster: | C4263_occipital_medial_Renal_liver_brain_olfactory_frontal |
Association with transcript: | 299bp_to_AK090958_5end |
EntrezGene: | SLC6A1 |
HGNC: | 11042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 5.04e-34 | 2 |
occipital lobe | 1.40e-14 | 5 |
neocortex | 1.02e-13 | 20 |
regional part of cerebral cortex | 1.25e-12 | 22 |
gyrus | 2.45e-12 | 6 |
cerebral cortex | 2.63e-11 | 25 |
pallium | 2.63e-11 | 25 |
temporal lobe | 8.99e-11 | 6 |
regional part of telencephalon | 3.79e-09 | 32 |
cerebral hemisphere | 3.79e-09 | 32 |
brain grey matter | 1.09e-08 | 34 |
gray matter | 1.09e-08 | 34 |
telencephalon | 1.09e-08 | 34 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |