FFCP PHASE1:Hg19::chr19:3980592..3980608,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:3980592..3980608,- | |||
|coexpression_cluster_id=C1061 | |||
|description=CAGE_peak_at_chr19:3980592..3980608,- | |description=CAGE_peak_at_chr19:3980592..3980608,- | ||
|id=chr19:3980592..3980608,- | |id=chr19:3980592..3980608,- | ||
|ontology_enrichment_celltype=CL:0002321!2.14e-09!248;CL:0000055!2.32e-09!180;CL:0000220!5.25e-09!246;CL:0000393!1.01e-07!60;CL:0000211!1.01e-07!60;CL:0002371!1.62e-07!591;CL:0000222!2.03e-07!119;CL:0000183!3.77e-07!59;CL:0000144!4.04e-07!625 | |ontology_enrichment_celltype=CL:0002321!2.14e-09!248;CL:0000055!2.32e-09!180;CL:0000220!5.25e-09!246;CL:0000393!1.01e-07!60;CL:0000211!1.01e-07!60;CL:0002371!1.62e-07!591;CL:0000222!2.03e-07!119;CL:0000183!3.77e-07!59;CL:0000144!4.04e-07!625 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.33e-09,250;CL:0000393,2.35e-08,61;CL:0000211,2.35e-08,61;CL:0000222,1.28e-07,121;CL:0000680,5.70e-07,58;CL:0000056,5.70e-07,58;CL:0000355,5.70e-07,58;CL:0000187,6.93e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!5.84e-09!70;UBERON:0000914!2.13e-08!83;UBERON:0002329!2.13e-08!83;UBERON:0003077!2.13e-08!83;UBERON:0003059!2.13e-08!83;UBERON:0007282!2.13e-08!83;UBERON:0009618!2.13e-08!83;UBERON:0007285!2.13e-08!83;UBERON:0000486!3.07e-08!82;UBERON:0005256!6.83e-08!143 | |ontology_enrichment_uberon=UBERON:0004290!5.84e-09!70;UBERON:0000914!2.13e-08!83;UBERON:0002329!2.13e-08!83;UBERON:0003077!2.13e-08!83;UBERON:0003059!2.13e-08!83;UBERON:0007282!2.13e-08!83;UBERON:0009618!2.13e-08!83;UBERON:0007285!2.13e-08!83;UBERON:0000486!3.07e-08!82;UBERON:0005256!6.83e-08!143 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.36e-11,78;UBERON:0007524,9.77e-10,73;UBERON:0002329,1.49e-09,71;UBERON:0003059,1.49e-09,71;UBERON:0007282,1.49e-09,71;UBERON:0004290,1.49e-09,71;UBERON:0009618,1.49e-09,71;UBERON:0003077,2.24e-09,72;UBERON:0007285,2.24e-09,72;UBERON:0000486,1.82e-08,83;UBERON:0005256,1.25e-07,122;UBERON:0003104,3.16e-07,160;UBERON:0009142,3.16e-07,160;UBERON:0000490,3.49e-07,148;UBERON:0001134,4.77e-07,62;UBERON:0002036,4.77e-07,62;UBERON:0003082,4.77e-07,62;UBERON:0002385,8.81e-07,64;UBERON:0001015,8.81e-07,64;UBERON:0000383,8.81e-07,64 | |||
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| ||
|short_description=p@chr19:3980592..3980608,- | |short_description=p@chr19:3980592..3980608,- | ||
}} | }} |
Latest revision as of 07:30, 26 July 2015
Short description: | p@chr19:3980592..3980608, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3980592..3980608, - |
Coexpression cluster: | C1061_skeletal_Bronchial_pancreas_iPS_diffuse_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.33e-09 | 250 |
electrically responsive cell | 2.35e-08 | 61 |
electrically active cell | 2.35e-08 | 61 |
mesodermal cell | 1.28e-07 | 121 |
muscle precursor cell | 5.70e-07 | 58 |
myoblast | 5.70e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.70e-07 | 58 |
muscle cell | 6.93e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.36e-11 | 78 |
dense mesenchyme tissue | 9.77e-10 | 73 |
somite | 1.49e-09 | 71 |
presomitic mesoderm | 1.49e-09 | 71 |
presumptive segmental plate | 1.49e-09 | 71 |
dermomyotome | 1.49e-09 | 71 |
trunk paraxial mesoderm | 1.49e-09 | 71 |
paraxial mesoderm | 2.24e-09 | 72 |
presumptive paraxial mesoderm | 2.24e-09 | 72 |
multilaminar epithelium | 1.82e-08 | 83 |
trunk mesenchyme | 1.25e-07 | 122 |
mesenchyme | 3.16e-07 | 160 |
entire embryonic mesenchyme | 3.16e-07 | 160 |
unilaminar epithelium | 3.49e-07 | 148 |
skeletal muscle tissue | 4.77e-07 | 62 |
striated muscle tissue | 4.77e-07 | 62 |
myotome | 4.77e-07 | 62 |
muscle tissue | 8.81e-07 | 64 |
musculature | 8.81e-07 | 64 |
musculature of body | 8.81e-07 | 64 |