FFCP PHASE1:Hg19::chr12:125348475..125348517,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:125348475..125348517,-
|short_description=p3@SCARB1
|description=CAGE_peak_3_at_SCARB1_5end
|association_with_transcript=1bp_to_NM_001082959,NM_005505,uc0...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=949 | |EntrezGene=949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1664 | |HGNC=1664 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8N0,Q8WTV0 | |UniProt=F8W8N0,Q8WTV0 | ||
|association_with_transcript=1bp_to_NM_001082959,NM_005505,uc001ugm.3,uc001ugn.3,uc001ugo.3,uc001ugp.3,uc010tbd.1_5end | |||
|cluster_id=chr12:125348475..125348517,- | |||
|description=CAGE_peak_3_at_SCARB1_5end | |||
|id=chr12:125348475..125348517,- | |||
|ontology_enrichment_celltype=CL:0000221!8.54e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.87e-08;82 | |||
|ontology_enrichment_disease=DOID:1240!1.62e-09!39;DOID:2531!6.34e-08!51;DOID:0060083!6.34e-08!51;DOID:8692!2.21e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.19e-08;39!DOID:8692;2.57e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.61e-09,39;DOID:2531,6.73e-08,51;DOID:0060083,6.73e-08,51;DOID:8692,2.20e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.79e-31!94;UBERON:0001016!6.79e-31!94;UBERON:0002346!6.96e-31!90;UBERON:0005743!7.22e-30!86;UBERON:0003075!8.55e-29!86;UBERON:0007284!8.55e-29!86;UBERON:0001017!1.64e-28!82;UBERON:0000955!4.18e-26!69;UBERON:0006238!4.18e-26!69;UBERON:0000924!7.69e-26!173;UBERON:0006601!7.69e-26!173;UBERON:0001049!2.65e-25!57;UBERON:0005068!2.65e-25!57;UBERON:0006241!2.65e-25!57;UBERON:0007135!2.65e-25!57;UBERON:0002616!7.97e-25!59;UBERON:0000033!3.46e-24!123;UBERON:0004121!4.88e-24!169;UBERON:0003056!1.18e-23!61;UBERON:0000153!8.79e-23!129;UBERON:0007811!8.79e-23!129;UBERON:0003080!2.04e-19!42;UBERON:0002780!3.64e-19!41;UBERON:0001890!3.64e-19!41;UBERON:0006240!3.64e-19!41;UBERON:0001893!2.34e-18!34;UBERON:0002791!9.28e-18!33;UBERON:0002020!1.03e-17!34;UBERON:0003528!1.03e-17!34;UBERON:0001869!1.16e-17!32;UBERON:0000956!2.95e-13!25;UBERON:0000203!2.95e-13!25;UBERON:0002619!1.34e-12!22;UBERON:0001950!1.27e-11!20;UBERON:0000119!1.36e-11!312;UBERON:0000483!5.29e-11!309;UBERON:0000064!1.56e-09!219;UBERON:0000475!3.01e-09!365;UBERON:0000481!4.83e-09!347;UBERON:0000477!1.09e-08!286;UBERON:0000025!1.13e-08!194;UBERON:0007023!3.58e-08!115;UBERON:0003076!4.37e-07!15;UBERON:0003057!4.37e-07!15;UBERON:0004111!5.47e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.07e-16;32!UBERON:0001893;4.77e-16;34!UBERON:0002791;9.98e-16;32!UBERON:0003528;1.27e-15;34!UBERON:0002020;1.27e-15;34!UBERON:0002780;4.38e-14;41!UBERON:0001890;4.38e-14;41!UBERON:0000073;1.08e-13;53!UBERON:0002616;1.08e-13;53!UBERON:0000956;2.55e-13;25!UBERON:0000203;2.55e-13;25!UBERON:0002619;1.26e-12;22!UBERON:0000955;7.07e-12;68!UBERON:0001950;1.22e-11;20!UBERON:0001017;1.83e-11;75!UBERON:0001016;1.85e-10;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.95e-29,86;UBERON:0001016,3.15e-29,89;UBERON:0001017,3.16e-28,81;UBERON:0003075,2.30e-27,82;UBERON:0007284,2.30e-27,82;UBERON:0000955,7.85e-26,68;UBERON:0006238,7.85e-26,68;UBERON:0001049,4.80e-25,56;UBERON:0005068,4.80e-25,56;UBERON:0006241,4.80e-25,56;UBERON:0007135,4.80e-25,56;UBERON:0000073,7.74e-24,53;UBERON:0002616,7.74e-24,53;UBERON:0004121,1.01e-23,171;UBERON:0000924,1.01e-23,171;UBERON:0006601,1.01e-23,171;UBERON:0003056,1.20e-23,61;UBERON:0010371,1.09e-20,104;UBERON:0002780,3.60e-19,41;UBERON:0001890,3.60e-19,41;UBERON:0003080,3.60e-19,41;UBERON:0006240,3.60e-19,41;UBERON:0011216,7.23e-19,223;UBERON:0001893,2.31e-18,34;UBERON:0010314,7.77e-18,132;UBERON:0003528,1.02e-17,34;UBERON:0002020,1.02e-17,34;UBERON:0001869,1.15e-17,32;UBERON:0002791,3.77e-17,32;UBERON:0000956,2.93e-13,25;UBERON:0000203,2.93e-13,25;UBERON:0002619,1.33e-12,22;UBERON:0001950,1.26e-11,20;UBERON:0000119,2.06e-10,309;UBERON:0000483,7.43e-10,306;UBERON:0000025,9.40e-09,192;UBERON:0007023,6.29e-08,114;UBERON:0003076,4.35e-07,15;UBERON:0003057,4.35e-07,15;UBERON:0004111,5.41e-07,240 | |||
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| ||
|short_description=p3@SCARB1 | |||
}} | }} |
Latest revision as of 04:39, 17 September 2015
Short description: | p3@SCARB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCARB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_NM_001082959, NM_005505, uc001ugm.3, uc001ugn.3, uc001ugo.3, uc001ugp.3, uc010tbd.1_5end |
EntrezGene: | SCARB1 |
HGNC: | 1664 |
UniProt: | F8W8N0Q8WTV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukemia | 1.61e-09 | 39 |
hematologic cancer | 6.73e-08 | 51 |
immune system cancer | 6.73e-08 | 51 |
myeloid leukemia | 2.20e-07 | 31 |