FFCP PHASE1:Hg19::chr19:36235552..36235619,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=199746 | |EntrezGene=199746 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23020 | |HGNC=23020 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_uc002obh.1_5end | |association_with_transcript=19bp_to_uc002obh.1_5end | ||
|cluster_id=chr19:36235552..36235619,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_U2AF1L4_5end | |description=CAGE_peak_2_at_U2AF1L4_5end | ||
|id=chr19:36235552..36235619,- | |id=chr19:36235552..36235619,- | ||
|ontology_enrichment_celltype=CL:0000037!2.89e-50!172;CL:0000566!2.89e-50!172;CL:0000988!8.58e-49!182;CL:0002032!1.62e-46!165;CL:0000837!1.62e-46!165;CL:0000738!6.20e-46!140;CL:0002031!2.06e-37!124;CL:0002087!3.36e-37!119;CL:0000542!3.73e-26!53;CL:0000051!3.73e-26!53;CL:0000838!1.74e-25!52;CL:0000763!1.44e-20!112;CL:0000049!1.44e-20!112;CL:0000766!1.22e-14!76;CL:0000557!2.61e-14!71;CL:0000084!9.42e-14!25;CL:0000827!9.42e-14!25;CL:0000839!1.54e-12!70;CL:0002009!3.40e-12!65;CL:0000791!3.60e-12!18;CL:0000789!3.60e-12!18;CL:0002420!3.60e-12!18;CL:0002419!3.60e-12!18;CL:0000790!3.60e-12!18;CL:0000945!2.12e-11!24;CL:0000826!2.12e-11!24;CL:0000219!2.19e-11!390;CL:0002194!2.53e-11!63;CL:0000576!2.53e-11!63;CL:0000040!2.53e-11!63;CL:0000559!2.53e-11!63;CL:0000134!1.00e-10!358;CL:0002057!2.98e-10!42;CL:0002320!8.85e-10!365;CL:0000860!3.58e-09!45;CL:0000236!2.81e-08!14;CL:0000451!4.08e-08!10;CL:0000625!4.72e-08!11;CL:0000034!1.14e-07!444;CL:0000990!5.93e-07!8 | |ontology_enrichment_celltype=CL:0000037!2.89e-50!172;CL:0000566!2.89e-50!172;CL:0000988!8.58e-49!182;CL:0002032!1.62e-46!165;CL:0000837!1.62e-46!165;CL:0000738!6.20e-46!140;CL:0002031!2.06e-37!124;CL:0002087!3.36e-37!119;CL:0000542!3.73e-26!53;CL:0000051!3.73e-26!53;CL:0000838!1.74e-25!52;CL:0000763!1.44e-20!112;CL:0000049!1.44e-20!112;CL:0000766!1.22e-14!76;CL:0000557!2.61e-14!71;CL:0000084!9.42e-14!25;CL:0000827!9.42e-14!25;CL:0000839!1.54e-12!70;CL:0002009!3.40e-12!65;CL:0000791!3.60e-12!18;CL:0000789!3.60e-12!18;CL:0002420!3.60e-12!18;CL:0002419!3.60e-12!18;CL:0000790!3.60e-12!18;CL:0000945!2.12e-11!24;CL:0000826!2.12e-11!24;CL:0000219!2.19e-11!390;CL:0002194!2.53e-11!63;CL:0000576!2.53e-11!63;CL:0000040!2.53e-11!63;CL:0000559!2.53e-11!63;CL:0000134!1.00e-10!358;CL:0002057!2.98e-10!42;CL:0002320!8.85e-10!365;CL:0000860!3.58e-09!45;CL:0000236!2.81e-08!14;CL:0000451!4.08e-08!10;CL:0000625!4.72e-08!11;CL:0000034!1.14e-07!444;CL:0000990!5.93e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.84e-21;53!CL:0000084;7.19e-20;25!CL:0000791;9.95e-18;18!CL:0000789;9.95e-18;18!CL:0002419;9.95e-18;18!CL:0002087;3.27e-15;104!CL:0000945;5.26e-15;24!CL:0000738;6.62e-13;136!CL:0000988;5.64e-12;177!CL:0000451;1.44e-11;10!CL:0000625;1.88e-11;11!CL:0000236;1.53e-10;13!CL:0000990;8.40e-10;8!CL:0000766;1.69e-09;69!CL:0000576;3.04e-09;48!CL:0000860;4.37e-08;33!CL:0002057;4.37e-08;33!CL:0000473;1.21e-07;39!CL:0000234;1.21e-07;39!CL:0000624;3.44e-07;6!CL:0000763;4.12e-07;100!CL:0000840;6.31e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.33e-70,168;CL:0000988,7.10e-69,177;CL:0000738,7.24e-68,136;CL:0002032,2.42e-65,161;CL:0000837,2.42e-65,161;CL:0002031,4.85e-55,120;CL:0002087,5.85e-55,115;CL:0000542,4.52e-37,53;CL:0000051,4.52e-37,53;CL:0000838,4.65e-36,52;CL:0000763,5.74e-28,108;CL:0000049,5.74e-28,108;CL:0000766,2.89e-22,72;CL:0000557,2.47e-21,67;CL:0000134,1.04e-19,354;CL:0000084,1.10e-19,25;CL:0000827,1.10e-19,25;CL:0000219,1.12e-18,386;CL:0002320,1.90e-18,361;CL:0000839,2.17e-18,66;CL:0002009,4.66e-18,61;CL:0000791,1.02e-17,18;CL:0000789,1.02e-17,18;CL:0002420,1.02e-17,18;CL:0002419,1.02e-17,18;CL:0000790,1.02e-17,18;CL:0002194,1.06e-16,59;CL:0000576,1.06e-16,59;CL:0000040,1.06e-16,59;CL:0000559,1.06e-16,59;CL:0000945,4.23e-15,24;CL:0000826,4.23e-15,24;CL:0000473,1.11e-14,48;CL:0000234,1.11e-14,48;CL:0000860,1.03e-13,42;CL:0002057,1.03e-13,42;CL:0000034,1.11e-13,441;CL:0000451,1.52e-11,10;CL:0000625,1.89e-11,11;CL:0000048,2.33e-11,427;CL:0000723,2.71e-11,433;CL:0000236,5.88e-11,14;CL:0000990,8.79e-10,8;CL:0002393,2.13e-07,9;CL:0002397,2.13e-07,9;CL:0000624,3.52e-07,6;CL:0000840,6.42e-07,5;CL:0001029,6.42e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;1.84e-21;53!CL:0000790;9.95e-18;18!CL:0002057;1.46e-10;42!CL:0000049;3.91e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!2.54e-08!51;DOID:0060083!2.54e-08!51 | |ontology_enrichment_disease=DOID:2531!2.54e-08!51;DOID:0060083!2.54e-08!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.56e-07,51;DOID:0060083,2.56e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.83e-23!102;UBERON:0003061!2.83e-23!102;UBERON:0002193!5.33e-22!112;UBERON:0002405!1.32e-14!115;UBERON:0002371!7.71e-14!80;UBERON:0001474!2.19e-12!86;UBERON:0002384!2.63e-09!375;UBERON:0004765!1.53e-08!101;UBERON:0001434!1.53e-08!101;UBERON:0000178!2.27e-08!15;UBERON:0000179!2.27e-08!15;UBERON:0000463!2.27e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.03e-12;15!UBERON:0000179;7.03e-12;15!UBERON:0000463;7.03e-12;15!UBERON:0002390;9.56e-10;32 | |||
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|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0.737201809504527,1.39560233594486,0,0.263766978228454,0.495065411840187,0,0,0.602694528023977,0,0.975865597581014,0.738726348460727,0,0.313454721478088,0.286235987131057,0.547497700291537,0.376627918784408,4.89045796786888,3.69452652524756,3.93553906568396,5.90046415273356,3.0706351847777,3.09632246632152,0,0,0.369754010166788,6.50724484874534,3.83856927716038,4.9912074686924,6.64794490238253,2.80762226458198,1.95309783644267,6.94137970143765,6.47787332037959,4.12120908214698,1.16318591023652,2.26725566213286,1.94067248950253,1.39457422143411,3.28934310417461,1.54853185447552,1.43846196161075,1.5369642391746,4.7296445977717,1.03423704220986,0,0,1.50593871634084,1.36453075028923,2.69668181334102,0.306083892370903,1.28371610830437,4.47535988059329,1.9791078011203,2.79249120670285,2.13112375266347,1.16083695451434,1.13477044938228,0.622822248995575,0.75374599577023,0.521482918420201,4.34377689410233,3.02699751316684,1.84138817993782,2.53169909952708,13.9428488965882,9.14198489849687,8.17668717482666,4.4931452458598,3.15371474967163,3.2145117339416,8.55038231223746,6.96208370196815,6.75857368929146,21.1195493353587,21.2994058392231,22.2377313465889,24.3236226862909,28.8285110665929,18.9668305184979,21.8144808019005,26.7135051269902,12.5226853204079,16.4426413023863,14.9086558968839,1.32171328579026,1.12101712596307,1.84368859342554,20.8512356320663,13.3623659334716,23.027367887945,41.7966238476695,35.8514493296949,50.6589152136165,35.068811113424,44.2299513834139,35.9419207119301,33.894685871294,39.5373641096923,30.6138254144364,33.2951929753288,27.6255679734176,27.358651760799,55.6421924611301,48.3414195908317,39.8635833853672,43.9049199980903,27.0809329047183,31.4240804753575,30.5828426479541,36.1818159587889,29.3080181178169,27.996588515826,38.018081777935,22.7368429807437,27.5171213982,24.9861453104692,24.1512797084897,22.1704559168683,12.4996180799334,8.55808626507223,15.0617380038111,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.43917392846563,1.30979075497713,0,0.370784442784429,30.5074550035402,36.3931150955468,22.2039794066505,18.840759320122,20.0198218773045,23.7732800850922,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.563057402416611,0,0.949265659568129,0,3.9534125230819,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0.709336764396714,0,1.06748995729705,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0.448346041655403,0.23486899728753,0.485618833104395,0.140450806702248,0.61246251376468,0.368502951935304,0.103325781175765,1.18800285728205,0,0,0.718618141816238,0.336672227908132,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0.340296549480063,0.179389635688862,0,0.211931901159562,0,0,0,0.558350568994769,0.168776332241266,0,0,0.184099797284599,0,0,0,0.508681776931463,0,0,0,7.68434348616451,3.44577397635862,4.88014560051977,4.5610864206763,7.0649838245176,4.01475094983413,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0.236613600079688,0.337169380156203,0.482022059766964,0.330881918197182,0,0.237270619111097,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0.8231480226628,0,2.53510069643662,1.96565443335525,0.590789906681404,0.882926198829301,0.368965315629341,0.343135620597051,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,1.03993478527958,1.44331342025273,1.04337364477569,0,0.144366447761074,0.462985512576611,0,1.58040879591855,0,1.96973604869918,0.936017060556951,3.41851673264075,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,2.95597942737566,6.77972941901841,5.1832028885193,4.17947864909188,5.6809095041871,0.507983154337352,0.763976851116555,1.17217447210047,0,0.616964956219941,1.20137223137567,0.285826432630578,0.224262168690721,0.87192013766656,0.80672114403045,0.258543431515556,0,0,0.26593811658487,0,1.28603687131071,0,0.532844358032199,0.142977993658148,0,1.64648067356154,0,0.355391948742546,1.58390374586686,0.301439377059586,0,0.099972991182057,6.08118903205952,8.53837055434615,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,7.73387493555338,11.6248148519137,7.97822026980214,10.3957859386596,1.27047312111232,0,0.773288812777695,1.17261385734044,0.637938751653163,1.49801404789436,2.99161459204025,1.65766205374414,0.12269149171914,0,0.271265023699736,0,0,0,0.117141414992713,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0,10.7519373583901,10.7857100409308,9.49875264450655,0.606255142892519,0,0.30239029332968,0.496215615637554,0,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0.739144404124282,0,0.348631135379878,0.483437798366489,0.40101294060657,0.184161977871793,0,0.182091168006717,0.262248829918848,0.451199612907412,0.0770153371044148,1.56869953835371,0,0.316654886678627,1.13733384070897,0.170093705276516,0,0,0.5418928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| ||
|short_description=p2@U2AF1L4 | |short_description=p2@U2AF1L4 | ||
}} | }} |
Latest revision as of 13:04, 17 September 2015
Short description: | p2@U2AF1L4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_U2AF1L4_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 19bp_to_uc002obh.1_5end |
EntrezGene: | U2AF1L4 |
HGNC: | 23020 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.64e-34 | 98 |
blood island | 7.64e-34 | 98 |
hemolymphoid system | 1.15e-30 | 108 |
immune system | 3.40e-21 | 93 |
bone marrow | 1.87e-19 | 76 |
bone element | 1.96e-17 | 82 |
connective tissue | 3.88e-17 | 371 |
skeletal element | 2.55e-14 | 90 |
blood | 6.23e-12 | 15 |
haemolymphatic fluid | 6.23e-12 | 15 |
organism substance | 6.23e-12 | 15 |
skeletal system | 3.12e-11 | 100 |
lateral plate mesoderm | 5.80e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.56e-07 | 51 |
immune system cancer | 2.56e-07 | 51 |