FFCP PHASE1:Hg19::chr19:3574400..3574430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10362 | |EntrezGene=10362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5002 | |HGNC=5002 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=109bp_to_ENST00000486028_5end | |association_with_transcript=109bp_to_ENST00000486028_5end | ||
|cluster_id=chr19:3574400..3574430,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_6_at_HMG20B_5end | |description=CAGE_peak_6_at_HMG20B_5end | ||
|id=chr19:3574400..3574430,+ | |id=chr19:3574400..3574430,+ | ||
|ontology_enrichment_celltype=CL:0000148!2.06e-12!10;CL:0000541!2.06e-12!10;CL:0000710!5.41e-09!20;CL:0000147!6.67e-08!14 | |ontology_enrichment_celltype=CL:0000148!2.06e-12!10;CL:0000541!2.06e-12!10;CL:0000710!5.41e-09!20;CL:0000147!6.67e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.80e-45;10!CL:0002567;6.64e-39;3!CL:0000147;2.63e-32;14!CL:0000710;1.48e-22;20!CL:0000075;1.21e-16;27!CL:0002566;5.15e-14;1!CL:0002077;2.96e-11;34!CL:0002593;1.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.80e-45,10;CL:0000541,2.80e-45,10;CL:0002567,6.65e-39,3;CL:0000147,2.63e-32,14;CL:0000710,1.48e-22,20;CL:0000075,1.21e-16,27;CL:0002566,5.15e-14,1;CL:0000333,7.30e-14,41;CL:0002077,3.74e-13,34;CL:0000133,1.35e-09,59;CL:0000221,8.44e-08,72;CL:0002593,1.45e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.40e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.36e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.40e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.45e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.207322110030741,0.504641701751257,0.36497735907583,0,0,1.38134921352481,0,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0.462985512576611,0,0.790204397959275,0,0,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,20.8273093278314,49.6584953225761,63.2974214934254,53.0324582670386,38.0461723002297,0.901029173531752,16.5779330925735,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0.215714200818617,0,0,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,2.11300293513511,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0.921722292925374,1.3420566473545,1.16794399198336,0,0,0,0,0.33307196799782,0,0.935702702041099,0,0,0.111443384277478,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.709163045303809,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0.274792780205587,0.533034776018635,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.19351266257817,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0.157566364614447,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.137539436597234,0,0.674921674654501,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0.662091970365432,0.25426853765475,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.248385611765534,0.138348634936231,0,0.454947352624943,2.28372266835974,0.470531639396343,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0.219284049578707,0,0,0.168942440653073,0.256241518587947,0,0.607719912354764,0,0.974301544196942,0.398594520940089,1.30852315404675,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.339848664884159,0,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0.23248285073625,0,0,0,0.17071847709395,0,0,0,0,0,0,1.86123831398592,0.955538938977433,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.154348316215889,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0,0,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.218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| |phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.207322110030741,0.504641701751257,0.36497735907583,0,0,1.38134921352481,0,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0.462985512576611,0,0.790204397959275,0,0,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,20.8273093278314,49.6584953225761,63.2974214934254,53.0324582670386,38.0461723002297,0.901029173531752,16.5779330925735,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0.215714200818617,0,0,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,2.11300293513511,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0.921722292925374,1.3420566473545,1.16794399198336,0,0,0,0,0.33307196799782,0,0.935702702041099,0,0,0.111443384277478,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.709163045303809,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0.274792780205587,0.533034776018635,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.19351266257817,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0.157566364614447,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.137539436597234,0,0.674921674654501,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0.662091970365432,0.25426853765475,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.248385611765534,0.138348634936231,0,0.454947352624943,2.28372266835974,0.470531639396343,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0.219284049578707,0,0,0.168942440653073,0.256241518587947,0,0.607719912354764,0,0.974301544196942,0.398594520940089,1.30852315404675,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.339848664884159,0,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0.23248285073625,0,0,0,0.17071847709395,0,0,0,0,0,0,1.86123831398592,0.955538938977433,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.154348316215889,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0,0,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.218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| ||
|short_description=p6@HMG20B | |short_description=p6@HMG20B | ||
}} | }} |
Latest revision as of 11:02, 17 September 2015
Short description: | p6@HMG20B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HMG20B_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 109bp_to_ENST00000486028_5end |
EntrezGene: | HMG20B |
HGNC: | 5002 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.80e-45 | 10 |
melanoblast | 2.80e-45 | 10 |
light melanocyte | 6.65e-39 | 3 |
pigment cell | 2.63e-32 | 14 |
neurecto-epithelial cell | 1.48e-22 | 20 |
columnar/cuboidal epithelial cell | 1.21e-16 | 27 |
dark melanocyte | 5.15e-14 | 1 |
migratory neural crest cell | 7.30e-14 | 41 |
ecto-epithelial cell | 3.74e-13 | 34 |
neurectodermal cell | 1.35e-09 | 59 |
ectodermal cell | 8.44e-08 | 72 |
smooth muscle cell of the internal thoracic artery | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.36e-07 | 2 |