FFCP PHASE1:Hg19::chr19:3557499..3557510,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126321 | |EntrezGene=126321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28299 | |HGNC=28299 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUT3,E9PAJ8,A8MXP7 | |UniProt=Q6NUT3,E9PAJ8,A8MXP7 | ||
|association_with_transcript=60bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | |association_with_transcript=60bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | ||
|cluster_id=chr19:3557499..3557510,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_3_at_MFSD12_5end | |description=CAGE_peak_3_at_MFSD12_5end | ||
|id=chr19:3557499..3557510,- | |id=chr19:3557499..3557510,- | ||
|ontology_enrichment_celltype=CL:0000235!2.13e-12!10;CL:0000990!1.01e-10!8;CL:0000451!1.60e-10!10;CL:0002009!2.38e-10!65;CL:0000557!1.65e-09!71;CL:0002194!5.77e-09!63;CL:0000576!5.77e-09!63;CL:0000040!5.77e-09!63;CL:0000559!5.77e-09!63;CL:0000453!4.76e-08!5;CL:0000839!5.35e-08!70;CL:0000148!1.07e-07!10;CL:0000541!1.07e-07!10;CL:0000766!2.05e-07!76;CL:0000840!7.00e-07!5;CL:0001029!7.00e-07!5 | |ontology_enrichment_celltype=CL:0000235!2.13e-12!10;CL:0000990!1.01e-10!8;CL:0000451!1.60e-10!10;CL:0002009!2.38e-10!65;CL:0000557!1.65e-09!71;CL:0002194!5.77e-09!63;CL:0000576!5.77e-09!63;CL:0000040!5.77e-09!63;CL:0000559!5.77e-09!63;CL:0000453!4.76e-08!5;CL:0000839!5.35e-08!70;CL:0000148!1.07e-07!10;CL:0000541!1.07e-07!10;CL:0000766!2.05e-07!76;CL:0000840!7.00e-07!5;CL:0001029!7.00e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000990;1.25e-33;8!CL:0000235;6.01e-30;6!CL:0000451;2.66e-27;10!CL:0000148;5.65e-25;10!CL:0000453;1.89e-23;5!CL:0000840;1.23e-20;5!CL:0000147;1.46e-17;14!CL:0002567;1.01e-16;3!CL:0000710;5.39e-12;20!CL:0001014;2.93e-10;2!CL:0001016;2.93e-10;2!CL:0000075;1.26e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.28e-33,8;CL:0000235,5.86e-30,6;CL:0000451,2.71e-27,10;CL:0000148,5.65e-25,10;CL:0000541,5.65e-25,10;CL:0000453,1.93e-23,5;CL:0000840,1.39e-20,5;CL:0001029,1.39e-20,5;CL:0000147,1.46e-17,14;CL:0002567,1.01e-16,3;CL:0000710,5.39e-12,20;CL:0001014,3.39e-10,2;CL:0001016,3.39e-10,2;CL:0002009,4.12e-09,61;CL:0000075,1.26e-08,27;CL:0000557,4.23e-08,67;CL:0000763,6.02e-07,108;CL:0000049,6.02e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.89e-12;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.03e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.00e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.13e-13!9;UBERON:0001557!7.34e-09!19;UBERON:0001474!2.39e-08!86;UBERON:0002371!3.17e-08!80;UBERON:0004765!5.04e-07!101;UBERON:0001434!5.04e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.65e-42;9!UBERON:0001557;1.65e-42;9!UBERON:0000072;3.59e-10;37!UBERON:0000065;1.07e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.61e-42,9;UBERON:0001557,2.43e-19,19;UBERON:0008947,5.51e-11,38;UBERON:0003258,5.51e-11,38;UBERON:0000072,1.54e-08,47;UBERON:0000065,3.34e-07,54;UBERON:0002371,6.96e-07,76 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0.689491361473237,0,2.70852973188684,0,0.545812300115692,0.224723484445085,0.918251677112708,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.6293934101306,53.457829350875,92.1398666395736,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,9.81946440330704,9.6093273344518,8.91740810568883,8.05146000946476,8.06153943141903,8.06720104977729,10.2471794201725,6.08286541888573,6.92544882503503,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,6.15542515218493,207.327778913365,63.6141374595757,0,0,0,0,0,0.766765358330422,0,0,0,0,0.12624243342638,154.363381024263,296.041029807665,259.050558334204,153.965201420435,122.056233838845,34.5394516520505,24.8668996388603,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,25.54099393465,4.52031382288914,37.9501091069457,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.596586391912706,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,3.9353685122798,0,1.54911749049875,0,0,0,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,4.03072315020264,0,0,0,0,0,0.108647371922008,0.638002319463839,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0,0.173559738335131,0,0.0870592065804026,0,0.171986032471617,11.9010287485575,10.3786830262383,9.60750847522548,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,2.32140586367385,0.0607495566580247,0,0.157611414598396,0.157363764404994,0,0.35857467866569,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0.122026264901963,0,0,0,0,0,0,2.57803499820801,15.1296626778833,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15571898244382,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,3.70234586794838,9.69913334287551,2.78061170234935,0,0,0.422624246717254,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0.0679697329768317,0.0657727735628491,0.354581522651905,0,0,0,0,0,0,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.223710863595585,0.196300467230486,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.645889098360061,0.186224142887574,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0.426909383510862,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0.689491361473237,0,2.70852973188684,0,0.545812300115692,0.224723484445085,0.918251677112708,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.6293934101306,53.457829350875,92.1398666395736,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,9.81946440330704,9.6093273344518,8.91740810568883,8.05146000946476,8.06153943141903,8.06720104977729,10.2471794201725,6.08286541888573,6.92544882503503,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,6.15542515218493,207.327778913365,63.6141374595757,0,0,0,0,0,0.766765358330422,0,0,0,0,0.12624243342638,154.363381024263,296.041029807665,259.050558334204,153.965201420435,122.056233838845,34.5394516520505,24.8668996388603,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,25.54099393465,4.52031382288914,37.9501091069457,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.596586391912706,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,3.9353685122798,0,1.54911749049875,0,0,0,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,4.03072315020264,0,0,0,0,0,0.108647371922008,0.638002319463839,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0,0.173559738335131,0,0.0870592065804026,0,0.171986032471617,11.9010287485575,10.3786830262383,9.60750847522548,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,2.32140586367385,0.0607495566580247,0,0.157611414598396,0.157363764404994,0,0.35857467866569,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0.122026264901963,0,0,0,0,0,0,2.57803499820801,15.1296626778833,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15571898244382,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,3.70234586794838,9.69913334287551,2.78061170234935,0,0,0.422624246717254,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0.0679697329768317,0.0657727735628491,0.354581522651905,0,0,0,0,0,0,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.223710863595585,0.196300467230486,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.645889098360061,0.186224142887574,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0.426909383510862,0,0,0,0,0,0,0,0 | ||
|short_description=p3@MFSD12 | |short_description=p3@MFSD12 | ||
}} | }} |
Latest revision as of 09:39, 17 September 2015
Short description: | p3@MFSD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MFSD12_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 60bp_to_ENST00000355415, ENST00000389395, ENST00000398558, NM_001042680, NM_021731, NM_174983, uc002lxw.2, uc002lxx.2, uc002lxz.2_5end |
EntrezGene: | MFSD12 |
HGNC: | 28299 |
UniProt: | Q6NUT3E9PAJ8A8MXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.28e-33 | 8 |
macrophage | 5.86e-30 | 6 |
dendritic cell | 2.71e-27 | 10 |
melanocyte | 5.65e-25 | 10 |
melanoblast | 5.65e-25 | 10 |
Langerhans cell | 1.93e-23 | 5 |
immature conventional dendritic cell | 1.39e-20 | 5 |
common dendritic progenitor | 1.39e-20 | 5 |
pigment cell | 1.46e-17 | 14 |
light melanocyte | 1.01e-16 | 3 |
neurecto-epithelial cell | 5.39e-12 | 20 |
CD1a-positive Langerhans cell | 3.39e-10 | 2 |
immature CD1a-positive Langerhans cell | 3.39e-10 | 2 |
macrophage dendritic cell progenitor | 4.12e-09 | 61 |
columnar/cuboidal epithelial cell | 1.26e-08 | 27 |
granulocyte monocyte progenitor cell | 4.23e-08 | 67 |
myeloid cell | 6.02e-07 | 108 |
common myeloid progenitor | 6.02e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.61e-42 | 9 |
upper respiratory tract | 2.43e-19 | 19 |
respiratory primordium | 5.51e-11 | 38 |
endoderm of foregut | 5.51e-11 | 38 |
segment of respiratory tract | 1.54e-08 | 47 |
respiratory tract | 3.34e-07 | 54 |
bone marrow | 6.96e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.00e-10 | 2 |