FFCP PHASE1:Hg19::chr2:74735271..74735288,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84759 | |EntrezGene=84759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17615 | |HGNC=17615 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSM1 | |UniProt=Q9BSM1 | ||
|association_with_transcript=418bp_to_ENST00000233630_5end | |association_with_transcript=418bp_to_ENST00000233630_5end | ||
|cluster_id=chr2:74735271..74735288,- | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_10_at_PCGF1_5end | |description=CAGE_peak_10_at_PCGF1_5end | ||
|id=chr2:74735271..74735288,- | |id=chr2:74735271..74735288,- | ||
|ontology_enrichment_celltype=CL:0002583!2.10e-12!2;CL:0000188!6.44e-10!9;CL:0002570!5.69e-07!8 | |ontology_enrichment_celltype=CL:0002583!2.10e-12!2;CL:0000188!6.44e-10!9;CL:0002570!5.69e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000333;7.72e-89;5!CL:0002321;1.91e-30;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.84e-11,41;CL:0000133,3.34e-08,59;CL:0000221,6.64e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000221;1.23e-07;72 | |||
|ontology_enrichment_disease=DOID:171!1.15e-09!10;DOID:169!1.35e-09!6 | |||
|ontology_enrichment_disease_v019=DOID:169;2.92e-74;6!DOID:171;4.50e-45;10!DOID:3095;4.13e-21;22!DOID:2994;4.13e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.31e-74,6;DOID:171,4.85e-45,10;DOID:3095,4.27e-21,22;DOID:2994,4.27e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.99e-11!5;UBERON:0002410!1.99e-11!5;UBERON:0000010!1.30e-10!8;UBERON:0003112!7.15e-07!1;UBERON:0000032!7.15e-07!1;UBERON:0005253!7.15e-07!1;UBERON:0003128!7.15e-07!1;UBERON:0002241!7.15e-07!1;UBERON:0001703!7.15e-07!1;UBERON:0004761!7.15e-07!1;UBERON:0009617!7.15e-07!1;UBERON:0006834!9.51e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.72e-89;5!UBERON:0002410;7.72e-89;5!UBERON:0000010;6.09e-50;8!UBERON:0001052;1.21e-13;4!UBERON:0004907;3.42e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,8.98e-89,5;UBERON:0002410,8.98e-89,5;UBERON:0000010,6.62e-50,8;UBERON:0001052,1.13e-13,4;UBERON:0004907,3.26e-11,5 | |||
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|short_description=p10@PCGF1 | |short_description=p10@PCGF1 | ||
}} | }} |
Latest revision as of 11:33, 18 September 2015
Short description: | p10@PCGF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PCGF1_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 418bp_to_ENST00000233630_5end |
EntrezGene: | PCGF1 |
HGNC: | 17615 |
UniProt: | Q9BSM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.84e-11 | 41 |
neurectodermal cell | 3.34e-08 | 59 |
ectodermal cell | 6.64e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 8.98e-89 | 5 |
autonomic nervous system | 8.98e-89 | 5 |
peripheral nervous system | 6.62e-50 | 8 |
rectum | 1.13e-13 | 4 |
lower digestive tract | 3.26e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.31e-74 | 6 |
neuroectodermal tumor | 4.85e-45 | 10 |
germ cell and embryonal cancer | 4.27e-21 | 22 |
germ cell cancer | 4.27e-21 | 22 |