FFCP PHASE1:Hg19::chr12:122430050..122430069,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:122430050..122430069,+
|short_description=p@chr12:122430050..122430069,+
|description=CAGE_peak_at_chr12:122430050..122430069,+
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:122430050..122430069,+ | |||
|coexpression_cluster_id=C2193 | |||
|description=CAGE_peak_at_chr12:122430050..122430069,+ | |||
|id=chr12:122430050..122430069,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.29e-17!43;CL:0002368!6.83e-16!13;CL:0000066!1.07e-15!254;CL:0002159!2.38e-13!13;CL:0000223!3.85e-13!59;CL:0002202!1.78e-12!9;CL:0002632!1.78e-12!9;CL:0002328!3.66e-08!3;CL:0000068!5.91e-08!3;CL:0000069!5.91e-08!3;CL:0000307!5.91e-08!3;CL:0000377!5.91e-08!3;CL:0002621!7.41e-08!3;CL:0000817!7.92e-08!3;CL:0002166!1.21e-07!3;CL:0000362!1.64e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002202;5.12e-38;9!CL:0002632;5.12e-38;9!CL:0002368;4.16e-26;13!CL:0002328;3.48e-22;3!CL:0000307;4.81e-22;3!CL:0000362;6.35e-20;9!CL:0002159;5.24e-18;14!CL:0000317;1.39e-15;2!CL:1000448;1.39e-15;2!CL:0002308;1.39e-15;2!CL:0002140;1.39e-15;2!CL:0000312;1.60e-13;5!CL:0000240;2.34e-11;6!CL:0000311;2.34e-11;6!CL:0000079;2.34e-11;6!CL:0000237;2.34e-11;6!CL:0002621;1.40e-10;3!CL:0000082;3.11e-09;19!CL:0000785;9.80e-09;1!CL:0000819;9.80e-09;1!CL:0002076;1.11e-08;42!CL:0000946;2.20e-08;1!CL:0000786;2.20e-08;1!CL:0000622;9.56e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,8.51e-38,9;CL:0002632,8.51e-38,9;CL:0002368,5.89e-26,13;CL:0002328,1.96e-22,3;CL:0000068,8.90e-22,3;CL:0000069,8.90e-22,3;CL:0000307,8.90e-22,3;CL:0000377,8.90e-22,3;CL:0000362,7.18e-20,9;CL:0002159,6.59e-18,14;CL:0000317,7.47e-16,2;CL:1000448,7.47e-16,2;CL:0002308,7.47e-16,2;CL:0002140,7.47e-16,2;CL:0000785,1.80e-15,2;CL:0000955,1.80e-15,2;CL:0000818,1.80e-15,2;CL:0000954,1.80e-15,2;CL:0000816,1.80e-15,2;CL:0000312,2.63e-13,5;CL:0002076,2.24e-12,42;CL:0000240,3.53e-11,6;CL:0000311,3.53e-11,6;CL:0000079,3.53e-11,6;CL:0000237,3.53e-11,6;CL:0000036,3.53e-11,6;CL:0000357,3.53e-11,6;CL:0000114,3.53e-11,6;CL:0002621,1.05e-10,3;CL:0000817,1.28e-10,3;CL:0000066,1.43e-09,253;CL:0000082,3.17e-09,19;CL:0000819,8.78e-09,1;CL:0000223,1.39e-08,58;CL:0000946,2.13e-08,1;CL:0000786,2.13e-08,1;CL:0000980,2.13e-08,1;CL:0002077,4.44e-07,34;CL:0000622,7.49e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;4.81e-22;3!CL:0000954;2.08e-15;2!CL:0000357;2.34e-11;6!CL:0000114;2.34e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!7.62e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.18e-12;10!DOID:0060073;9.80e-09;1!DOID:8675;9.80e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.10e-12,10;DOID:0060073,8.78e-09,1;DOID:8675,8.78e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!6.13e-09!72;UBERON:0005153!3.21e-08!37;UBERON:0004815!3.66e-08!3;UBERON:0002031!3.66e-08!3;UBERON:0004119!6.10e-08!169;UBERON:0000925!6.10e-08!169;UBERON:0006595!6.10e-08!169;UBERON:0005157!6.54e-08!51;UBERON:0001949!7.41e-08!3;UBERON:0000065!1.36e-07!53;UBERON:0007196!1.54e-07!14;UBERON:0001558!1.54e-07!14;UBERON:0004807!2.07e-07!28;UBERON:0003729!2.86e-07!5;UBERON:0002106!5.83e-07!3;UBERON:0004854!5.83e-07!3;UBERON:0009034!5.83e-07!3;UBERON:0002095!5.83e-07!3;UBERON:0004782!5.83e-07!3;UBERON:0003281!5.83e-07!3;UBERON:0009664!5.83e-07!3;UBERON:0002296!5.83e-07!3;UBERON:0005602!5.83e-07!3;UBERON:0001179!5.83e-07!3;UBERON:0006293!5.83e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.57e-22;15!UBERON:0001558;1.57e-22;15!UBERON:0004815;3.48e-22;3!UBERON:0002031;3.48e-22;3!UBERON:0002419;1.39e-15;2!UBERON:0007771;1.39e-15;2!UBERON:0003297;1.39e-15;2!UBERON:0001821;1.39e-15;2!UBERON:0003487;1.39e-15;2!UBERON:0001820;1.39e-15;2!UBERON:0004807;4.06e-15;22!UBERON:0002185;1.50e-13;5!UBERON:0001003;6.78e-12;15!UBERON:0007376;6.78e-12;15!UBERON:0005178;7.00e-12;34!UBERON:0002224;7.00e-12;34!UBERON:0005911;6.66e-11;36!UBERON:0005181;1.30e-10;35!UBERON:0001949;1.40e-10;3!UBERON:0010371;2.02e-10;31!UBERON:0000485;7.96e-10;7!UBERON:0003126;9.12e-10;7!UBERON:0001005;9.12e-10;7!UBERON:0004802;3.11e-09;19!UBERON:0000115;3.11e-09;19!UBERON:0000072;3.67e-09;37!UBERON:0002048;6.03e-08;22!UBERON:0000117;6.03e-08;22!UBERON:0000171;6.03e-08;22!UBERON:0000170;6.03e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.96e-22,3;UBERON:0002031,1.96e-22,3;UBERON:0007196,2.12e-22,15;UBERON:0001558,2.12e-22,15;UBERON:0002419,7.47e-16,2;UBERON:0007771,7.47e-16,2;UBERON:0003297,7.47e-16,2;UBERON:0001821,7.47e-16,2;UBERON:0003487,7.47e-16,2;UBERON:0001820,7.47e-16,2;UBERON:0005089,7.47e-16,2;UBERON:0005088,7.47e-16,2;UBERON:0002185,1.07e-13,5;UBERON:0005178,2.99e-12,34;UBERON:0002224,2.99e-12,34;UBERON:0005181,7.20e-12,35;UBERON:0001003,7.28e-12,15;UBERON:0007376,7.28e-12,15;UBERON:0007383,7.28e-12,15;UBERON:0004807,9.60e-12,28;UBERON:0008947,7.59e-11,38;UBERON:0003258,7.59e-11,38;UBERON:0001949,1.05e-10,3;UBERON:0003126,1.18e-09,7;UBERON:0001005,1.18e-09,7;UBERON:0004802,3.17e-09,19;UBERON:0000115,3.17e-09,19;UBERON:0000072,1.47e-08,47;UBERON:0001004,5.74e-08,74;UBERON:0002048,6.13e-08,22;UBERON:0000117,6.13e-08,22;UBERON:0000171,6.13e-08,22;UBERON:0000170,6.13e-08,22;UBERON:0005597,6.13e-08,22;UBERON:0000118,6.13e-08,22;UBERON:0000485,7.95e-08,9;UBERON:0000915,1.24e-07,52;UBERON:0000065,2.61e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.309632246632152,4.59710612239464,1.8072355126695,1.47901604066715,0.0774672005803016,11.9422155289434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0,0,0,1.24564449799115,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,1.90922284413584,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29250856225877,1.1240175325762,1.10581869652794,0.833296006426766,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,1.17587489739202,0.850650583454319,0.268675568108545,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,5.16838984196555,1.95018073810956,0,0,0,0,0,0,0,0,0,0.661139661443912,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,2.68120910214315,1.08890984861323,0,0.86101074534246,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4793148277115,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,2.91927662745066,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0.489961987071888,0.0870592065804026,0,0.687944129886466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,1.37280437475228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,8.28189668990092,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.917142992608395,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,1.38280785066935,0,0,0,1.89110145414349,0.444925607568277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,3.0981758336728,0,1.41157948686277,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,2.44773191380756,0,0.18378979906969,0,0,0,0,0,0,0,0,0.248298857183432,0,0,0,0.217716747896961,0,0.875576689189638,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.309632246632152,4.59710612239464,1.8072355126695,1.47901604066715,0.0774672005803016,11.9422155289434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0,0,0,1.24564449799115,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,1.90922284413584,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29250856225877,1.1240175325762,1.10581869652794,0.833296006426766,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,1.17587489739202,0.850650583454319,0.268675568108545,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,5.16838984196555,1.95018073810956,0,0,0,0,0,0,0,0,0,0.661139661443912,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,2.68120910214315,1.08890984861323,0,0.86101074534246,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4793148277115,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,2.91927662745066,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0.489961987071888,0.0870592065804026,0,0.687944129886466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,1.37280437475228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,8.28189668990092,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.917142992608395,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,1.38280785066935,0,0,0,1.89110145414349,0.444925607568277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,3.0981758336728,0,1.41157948686277,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,2.44773191380756,0,0.18378979906969,0,0,0,0,0,0,0,0,0.248298857183432,0,0,0,0.217716747896961,0,0.875576689189638,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:122430050..122430069,+ | |||
}} | }} |
Latest revision as of 06:02, 24 July 2015
Short description: | p@chr12:122430050..122430069, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122430050..122430069, + |
Coexpression cluster: | C2193_Burkitt_lymphoma_Sebocyte_Keratinocyte_Tracheal_Gingival_Bronchial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.10e-12 | 10 |
lymphatic system cancer | 8.78e-09 | 1 |
lymphosarcoma | 8.78e-09 | 1 |