FFCP PHASE1:Hg19::chr19:19738989..19739005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9170 | |EntrezGene=9170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3168 | |HGNC=3168 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBW0 | |UniProt=Q9HBW0 | ||
|association_with_transcript=33bp_to_ENST00000407877,NM_004720,uc002nna.3,uc002nnb.3_5end | |association_with_transcript=33bp_to_ENST00000407877,NM_004720,uc002nna.3,uc002nnb.3_5end | ||
|cluster_id=chr19:19738989..19739005,- | |||
|description=CAGE_peak_3_at_LPAR2_5end | |description=CAGE_peak_3_at_LPAR2_5end | ||
|id=chr19:19738989..19739005,- | |id=chr19:19738989..19739005,- | ||
|ontology_enrichment_celltype=CL:0000066!4.78e-12!254;CL:0000791!4.60e-10!18;CL:0000789!4.60e-10!18;CL:0002420!4.60e-10!18;CL:0002419!4.60e-10!18;CL:0000790!4.60e-10!18 | |ontology_enrichment_celltype=CL:0000066!4.78e-12!254;CL:0000791!4.60e-10!18;CL:0000789!4.60e-10!18;CL:0002420!4.60e-10!18;CL:0002419!4.60e-10!18;CL:0000790!4.60e-10!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.79e-11;18!CL:0000789;2.79e-11;18!CL:0002419;2.79e-11;18!CL:0000624;4.10e-10;6!CL:0000084;3.13e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.88e-11,18;CL:0000789,1.88e-11,18;CL:0002420,1.88e-11,18;CL:0002419,1.88e-11,18;CL:0000790,1.88e-11,18;CL:0000624,3.31e-10,6;CL:0000084,2.41e-07,25;CL:0000827,2.41e-07,25;CL:0000066,8.13e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000790;2.79e-11;18!UBERON:0009117;9.65e-10;10!UBERON:0005564;9.65e-10;10 | |||
|ontology_enrichment_disease=DOID:305!2.04e-09!106;DOID:0050687!7.14e-09!143 | |ontology_enrichment_disease=DOID:305!2.04e-09!106;DOID:0050687!7.14e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.33e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.17e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.67e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,5.58240934377942,1.74753097704138,2.11013582582763,0,0,0,0,0,0,0.61560529038394,0.408001382488506,0,0.286235987131057,0.410623275218653,0.251085279189606,1.60468152070698,0.57470412614962,1.18066171970519,0,0,0.464448369948228,0,0,0.369754010166788,0,0.142169232487422,0,0.553995408531877,0,1.30206522429511,0,0.647787332037959,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0.822335776043652,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,5.11445402295966,1.57204305099666,12.130488440971,4.51403537554831,4.88883399950386,0.473447805734733,5.84480185223734,4.12218690475142,1.47302953737419,1.99380505125259,2.97884250141517,7.81357050326618,9.23421367675135,2.95988228286617,3.59255023121603,1.44901542867526,1.77943875794473,1.60524496853828,0,2.71942422474159,2.29932296161153,2.40539211837841,1.01207876807801,0.637130828648193,1.30216690771284,1.90090408889675,0.451725357233318,0.895906278080929,3.74792179657038,0.236777252044017,0,4.03213486449465,4.54648332831962,6.37227377084316,0,0,0,0,0,0,0,0,0.189069634328136,0,0.527008714158756,1.70272798147026,1.45718115317017,0.741568885568859,0.324547393654683,0,0.398873881556595,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51239109112286,1.63647672354501,3.44165514466805,1.46368447355514,1.45782745153634,1.39432731443422,0.725627385107593,1.7662459561294,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.983907508344908,0,1.09750285408626,2.24803506515239,1.3068766413512,0.277765335475589,0.651616610620649,0,0,0.231860809950154,0.117408694235822,0,0,0,2.37061319387782,1.71697232418975,0,0,0.297262324577456,0.93733833986777,2.51973192298289,1.70130116690864,0.626909658919938,0.581267877027924,1.15014803749563,0,0,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0.857479297891735,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.560425719967636,1.97030760201927,1.72502059887614,2.43851768931522,0.254094624222463,0,0,2.34522771468088,0,0.749007023947182,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,1.24060815673732,4.96142661882819,2.24127871387233,1.5156378572313,0,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0.802025881213139,2.02578175658972,0,0,0,0.451199612907412,0.847168708148562,0,2.92278449306521,0.105551628892876,0,0,0,0,0.541892875087706,0,1.01950509218015,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.206082023295445,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0.495854746082934,1.53752053892085,0.893288987462089,1.8208400553999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0.865999014529609,0,0,0.0941438007767792,3.01353760869861,3.36942951335251,0.443430153536676,0,0,0,0,0.238231775457789,0.822724546172388,0,0.540031437238115,1.58625035258854,0.106824071127473,0,1.22520107990516,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,1.19372242368845,0.593929361665277,0,0,0,0,0.494411622680279,1.26675244876796,0.19924798825107,2.21027132424918,0.251932747854276,0,1.10776324914963,0,1.70749867179921,0.537063524026827,0,0.295930216910801,0,0,0,0,0,1.30213880542617,1.31189999994294,0,1.2517279311405,0.254253650292766,1.18193840883968,0.344743373241465,0,0.868124974666461,0,0.120596438625408,0,0,0.295547618953547,0,0,0.697118721393016,0.230850775511391,0,1.61394733071642,0.448788222048861,0.977826347298073,2.23300811812344,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0.326465616318295,1.27217764290547,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,2.14250933141343,0,0,0,0,0,0,0,0,0,2.77695581336209,0.685946781900644,0.609414446062818,0.17472666824203,0,0.0967563312890851,0.292357268344742,0.164230914106418,0.387956065953678,1.94163478721301,0.677942222341597,0,0,0.126621591911757,3.51992488922645,1.36269994427607,2.13452994739353,0,2.3054466744657,0,0.343189995723929,0.288109595976299,0,1.64985824231757,0,0,0,1.73370353940911,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,2.41129722697529,4.40126197111148,3.73896304226267,0,0,0.121499113316049,0.335434687599266,0.315222829196793,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| ||
|short_description=p3@LPAR2 | |short_description=p3@LPAR2 | ||
}} | }} |
Latest revision as of 20:26, 16 September 2015
Short description: | p3@LPAR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LPAR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000407877, NM_004720, uc002nna.3, uc002nnb.3_5end |
EntrezGene: | LPAR2 |
HGNC: | 3168 |
UniProt: | Q9HBW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.88e-11 | 18 |
alpha-beta T cell | 1.88e-11 | 18 |
immature T cell | 1.88e-11 | 18 |
mature T cell | 1.88e-11 | 18 |
immature alpha-beta T cell | 1.88e-11 | 18 |
CD4-positive, alpha-beta T cell | 3.31e-10 | 6 |
T cell | 2.41e-07 | 25 |
pro-T cell | 2.41e-07 | 25 |
epithelial cell | 8.13e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
testis | 8.67e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.33e-08 | 106 |