FFCP PHASE1:Hg19::chr2:63605711..63605712,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:63605711..63605712,+ | |||
|coexpression_cluster_id=C728 | |||
|description=CAGE_peak_at_chr2:63605711..63605712,+ | |description=CAGE_peak_at_chr2:63605711..63605712,+ | ||
|id=chr2:63605711..63605712,+ | |id=chr2:63605711..63605712,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.55e-68!42;CL:0000860!3.59e-63!45;CL:0000557!2.00e-55!71;CL:0000839!1.23e-50!70;CL:0002009!6.80e-50!65;CL:0000766!2.74e-48!76;CL:0002194!4.45e-46!63;CL:0000576!4.45e-46!63;CL:0000040!4.45e-46!63;CL:0000559!4.45e-46!63;CL:0000763!1.63e-37!112;CL:0000049!1.63e-37!112;CL:0000738!1.40e-28!140;CL:0002031!1.44e-27!124;CL:0002032!4.16e-22!165;CL:0000837!4.16e-22!165;CL:0000037!1.22e-20!172;CL:0000566!1.22e-20!172;CL:0002087!2.61e-20!119;CL:0000988!9.58e-19!182;CL:0000453!4.29e-12!5;CL:0000134!6.11e-09!358;CL:0002320!1.74e-08!365;CL:0002274!5.71e-08!5;CL:0000457!5.71e-08!5;CL:0002191!5.71e-08!5;CL:0000097!5.71e-08!5;CL:0000831!5.71e-08!5;CL:0002028!5.71e-08!5;CL:0000219!7.80e-08!390;CL:0000048!1.24e-07!430;CL:0000034!2.39e-07!444;CL:0000723!2.59e-07!436 | |ontology_enrichment_celltype=CL:0002057!1.55e-68!42;CL:0000860!3.59e-63!45;CL:0000557!2.00e-55!71;CL:0000839!1.23e-50!70;CL:0002009!6.80e-50!65;CL:0000766!2.74e-48!76;CL:0002194!4.45e-46!63;CL:0000576!4.45e-46!63;CL:0000040!4.45e-46!63;CL:0000559!4.45e-46!63;CL:0000763!1.63e-37!112;CL:0000049!1.63e-37!112;CL:0000738!1.40e-28!140;CL:0002031!1.44e-27!124;CL:0002032!4.16e-22!165;CL:0000837!4.16e-22!165;CL:0000037!1.22e-20!172;CL:0000566!1.22e-20!172;CL:0002087!2.61e-20!119;CL:0000988!9.58e-19!182;CL:0000453!4.29e-12!5;CL:0000134!6.11e-09!358;CL:0002320!1.74e-08!365;CL:0002274!5.71e-08!5;CL:0000457!5.71e-08!5;CL:0002191!5.71e-08!5;CL:0000097!5.71e-08!5;CL:0000831!5.71e-08!5;CL:0002028!5.71e-08!5;CL:0000219!7.80e-08!390;CL:0000048!1.24e-07!430;CL:0000034!2.39e-07!444;CL:0000723!2.59e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.04e-46;33!CL:0002057;3.04e-46;33!CL:0000473;1.19e-37;39!CL:0000234;1.19e-37;39!CL:0000576;6.08e-27;48!CL:0000766;8.23e-26;69!CL:0001014;2.72e-13;2!CL:0001016;2.72e-13;2!CL:0000097;2.69e-12;5!CL:0000763;1.05e-11;100!CL:0000453;1.64e-11;5!CL:0002087;4.65e-10;104!CL:0000875;7.59e-09;3!CL:0002396;7.59e-09;3!CL:0000219;1.05e-07;193!CL:0000738;3.46e-07;136!CL:0000163;5.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.22e-55,67;CL:0000860,2.58e-53,42;CL:0002057,2.58e-53,42;CL:0000473,3.67e-51,48;CL:0000234,3.67e-51,48;CL:0000839,1.32e-47,66;CL:0000766,2.24e-47,72;CL:0002009,5.16e-47,61;CL:0002194,4.48e-40,59;CL:0000576,4.48e-40,59;CL:0000040,4.48e-40,59;CL:0000559,4.48e-40,59;CL:0000763,1.12e-38,108;CL:0000049,1.12e-38,108;CL:0000738,1.07e-29,136;CL:0002031,4.56e-29,120;CL:0002032,2.69e-24,161;CL:0000837,2.69e-24,161;CL:0000037,4.54e-23,168;CL:0000988,1.24e-21,177;CL:0002087,1.21e-18,115;CL:0001014,1.82e-13,2;CL:0001016,1.82e-13,2;CL:0000097,2.75e-12,5;CL:0002028,2.75e-12,5;CL:0000453,1.61e-11,5;CL:0000134,5.62e-11,354;CL:0002320,1.19e-10,361;CL:0000219,1.65e-09,386;CL:0000875,7.01e-09,3;CL:0002396,7.01e-09,3;CL:0000048,4.16e-08,427;CL:0000723,6.50e-08,433;CL:0000034,1.16e-07,441;CL:0000163,5.15e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.13e-37;42!CL:0000049;1.07e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.51e-50!80;UBERON:0001474!9.60e-46!86;UBERON:0004765!7.22e-41!101;UBERON:0001434!7.22e-41!101;UBERON:0002390!1.84e-36!102;UBERON:0003061!1.84e-36!102;UBERON:0002193!2.35e-35!112;UBERON:0002405!4.53e-34!115;UBERON:0002204!1.40e-23!167;UBERON:0003081!5.76e-15!216;UBERON:0002384!7.21e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.48e-48,76;UBERON:0001474,1.10e-44,82;UBERON:0004765,2.58e-40,90;UBERON:0002405,7.22e-39,93;UBERON:0002390,1.19e-36,98;UBERON:0003061,1.19e-36,98;UBERON:0001434,7.96e-36,100;UBERON:0002193,7.97e-33,108;UBERON:0002204,1.66e-19,167;UBERON:0003081,1.27e-16,203;UBERON:0002384,3.28e-10,371;UBERON:0000926,7.66e-09,315;UBERON:0004120,7.66e-09,315;UBERON:0006603,7.66e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72819656269481,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,1.13362783106643,0.242584061187816,0.232429036905685,0.822335776043652,1.85823822537062,2.8769239232215,1.2808035326455,1.18241114944293,2.06847408441971,9.03678557017357,4.06279459783025,0.188242339542605,0.545812300115692,0.674170453335254,3.97909060082173,0.641858054152187,7.67204550958849,0.989553900560148,0.199463657621632,0.852449501065388,1.16083695451434,2.8369261234557,3.73693349397345,0.75374599577023,1.0429658368404,1.3031330682307,0.605399502633369,0.368277635987565,1.89877432464531,0.211255286311942,1.27562579979026,0.209658645508376,0.336985893439485,1.05123824989054,0.32145117339416,0,1.19350006319454,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0.589211814949674,0.443067789167242,0.812411591295047,0,0.260118695119756,0.328875809207352,0,0,0.444859689486181,0.802622484269139,0,0.226618685395132,0,0,1.51811815211702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35021065793013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.839910640994298,0.708875486211932,0,0,0,0,0.088048434013226,15.7569367810987,5.04419836959365,10.7306068412423,0.317489471460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55200927785536,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,1.0629187225069,0.981392365535065,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72819656269481,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,1.13362783106643,0.242584061187816,0.232429036905685,0.822335776043652,1.85823822537062,2.8769239232215,1.2808035326455,1.18241114944293,2.06847408441971,9.03678557017357,4.06279459783025,0.188242339542605,0.545812300115692,0.674170453335254,3.97909060082173,0.641858054152187,7.67204550958849,0.989553900560148,0.199463657621632,0.852449501065388,1.16083695451434,2.8369261234557,3.73693349397345,0.75374599577023,1.0429658368404,1.3031330682307,0.605399502633369,0.368277635987565,1.89877432464531,0.211255286311942,1.27562579979026,0.209658645508376,0.336985893439485,1.05123824989054,0.32145117339416,0,1.19350006319454,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0.589211814949674,0.443067789167242,0.812411591295047,0,0.260118695119756,0.328875809207352,0,0,0.444859689486181,0.802622484269139,0,0.226618685395132,0,0,1.51811815211702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35021065793013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.839910640994298,0.708875486211932,0,0,0,0,0.088048434013226,15.7569367810987,5.04419836959365,10.7306068412423,0.317489471460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55200927785536,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,1.0629187225069,0.981392365535065,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:63605711..63605712,+ | |short_description=p@chr2:63605711..63605712,+ | ||
}} | }} |
Latest revision as of 11:19, 29 July 2015
Short description: | p@chr2:63605711..63605712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:63605711..63605712, + |
Coexpression cluster: | C728_Mast_CD14_Basophils_chorionic_immature_Monocytederived_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.48e-48 | 76 |
bone element | 1.10e-44 | 82 |
skeletal element | 2.58e-40 | 90 |
immune system | 7.22e-39 | 93 |
hematopoietic system | 1.19e-36 | 98 |
blood island | 1.19e-36 | 98 |
skeletal system | 7.96e-36 | 100 |
hemolymphoid system | 7.97e-33 | 108 |
musculoskeletal system | 1.66e-19 | 167 |
lateral plate mesoderm | 1.27e-16 | 203 |
connective tissue | 3.28e-10 | 371 |
mesoderm | 7.66e-09 | 315 |
mesoderm-derived structure | 7.66e-09 | 315 |
presumptive mesoderm | 7.66e-09 | 315 |