FFCP PHASE1:Hg19::chr19:16999902..16999936,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9002 | |EntrezGene=9002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3540 | |HGNC=3540 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RI0 | |UniProt=Q96RI0 | ||
|association_with_transcript=76bp_to_ENST00000248076,NM_003950,uc002nfa.2_5end | |association_with_transcript=76bp_to_ENST00000248076,NM_003950,uc002nfa.2_5end | ||
|cluster_id=chr19:16999902..16999936,+ | |||
|coexpression_cluster_id=C3762 | |||
|description=CAGE_peak_2_at_F2RL3_5end | |description=CAGE_peak_2_at_F2RL3_5end | ||
|id=chr19:16999902..16999936,+ | |id=chr19:16999902..16999936,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.07e-13!24;CL:0000115!1.34e-10!35;CL:0002274!1.81e-09!5;CL:0000457!1.81e-09!5;CL:0002191!1.81e-09!5;CL:0000097!1.81e-09!5;CL:0000831!1.81e-09!5;CL:0002028!1.81e-09!5;CL:0000071!2.40e-09!18;CL:0002546!2.40e-09!18;CL:0002078!1.36e-07!44;CL:0002144!1.87e-07!3 | |ontology_enrichment_celltype=CL:0002139!5.07e-13!24;CL:0000115!1.34e-10!35;CL:0002274!1.81e-09!5;CL:0000457!1.81e-09!5;CL:0002191!1.81e-09!5;CL:0000097!1.81e-09!5;CL:0000831!1.81e-09!5;CL:0002028!1.81e-09!5;CL:0000071!2.40e-09!18;CL:0002546!2.40e-09!18;CL:0002078!1.36e-07!44;CL:0002144!1.87e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002144;6.77e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,6.20e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;6.91e-10;1 | |||
|ontology_enrichment_disease=DOID:8692!1.17e-15!31;DOID:1240!7.17e-13!39;DOID:1036!2.23e-12!8;DOID:2531!1.15e-08!51;DOID:0060083!1.15e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.69e-21;31!DOID:1240;5.11e-12;39!DOID:1036;1.42e-10;8!DOID:8552;2.97e-10;1!DOID:2531;4.40e-08;51!DOID:0060083;4.40e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.46e-22,31;DOID:1240,4.95e-17,39;DOID:2531,1.01e-12,51;DOID:0060083,1.01e-12,51;DOID:1036,1.21e-10,8;DOID:8552,3.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.80e-09!115;UBERON:0001986!2.40e-09!18;UBERON:0004638!2.40e-09!18;UBERON:0004852!2.40e-09!18;UBERON:0001915!1.87e-07!3;UBERON:0001982!1.87e-07!3;UBERON:0000487!3.12e-07!22;UBERON:0001009!4.39e-07!113 | |ontology_enrichment_uberon=UBERON:0007023!1.80e-09!115;UBERON:0001986!2.40e-09!18;UBERON:0004638!2.40e-09!18;UBERON:0004852!2.40e-09!18;UBERON:0001915!1.87e-07!3;UBERON:0001982!1.87e-07!3;UBERON:0000487!3.12e-07!22;UBERON:0001009!4.39e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;6.77e-13;3!UBERON:0001915;6.77e-13;3!UBERON:0001982;6.77e-13;3!UBERON:0002171;3.55e-10;1!UBERON:0006518;3.55e-10;1!UBERON:0008949;3.55e-10;1!UBERON:0000101;3.55e-10;1!UBERON:0002167;3.55e-10;1!UBERON:0002084;6.91e-10;1!UBERON:0002082;6.91e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,6.20e-13,3;UBERON:0001915,6.20e-13,3;UBERON:0001982,6.20e-13,3;UBERON:0002171,3.71e-10,1;UBERON:0006518,3.71e-10,1;UBERON:0008949,3.71e-10,1;UBERON:0000101,3.71e-10,1;UBERON:0002167,3.71e-10,1;UBERON:0002084,8.24e-10,1;UBERON:0002082,8.24e-10,1;UBERON:0010226,8.24e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,4.83395180530976,0.760272105718513,3.90499292077071,0.367663080345869,0.81014194788176,0,0,0,1.53316637465883,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,8.98094026934906,0.621984346622316,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0,0,0,0.766021480529467,2.96343015813436,0,0.561594356226918,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0.835218521685727,1.23087398947712,4.32729085561573,0,8.45922030527097,0,1.31857361344705,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,1.53471711068062,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0.533034776018635,0,0.627921025580099,3.65665700180344,0.902382642468723,0.980312671588698,1.84603745673427,0.189753732724185,4.29128763247022,0,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.419636705079985,0.316801009558219,0,0,0,1.32418394073086,0,0,0,0,0,11.9855080294035,0,0,0.146552233678082,0,0,0,0,0,1.49502377594773,0.471612915298998,2.48543433208317,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0,1.04349012362347,0,0,0,1.45478927362048,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.513314034281235,0,0,0,0,0,0,0,0.150962843566674,0.540219106755613,0,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51557396436479,1.60778478093707,0,0,0,0,0,0.186224142887574,0.112131862580613,1.2729431655633,0.606351566874658,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,4.83395180530976,0.760272105718513,3.90499292077071,0.367663080345869,0.81014194788176,0,0,0,1.53316637465883,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,8.98094026934906,0.621984346622316,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0,0,0,0.766021480529467,2.96343015813436,0,0.561594356226918,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0.835218521685727,1.23087398947712,4.32729085561573,0,8.45922030527097,0,1.31857361344705,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,1.53471711068062,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0.533034776018635,0,0.627921025580099,3.65665700180344,0.902382642468723,0.980312671588698,1.84603745673427,0.189753732724185,4.29128763247022,0,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.419636705079985,0.316801009558219,0,0,0,1.32418394073086,0,0,0,0,0,11.9855080294035,0,0,0.146552233678082,0,0,0,0,0,1.49502377594773,0.471612915298998,2.48543433208317,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0,1.04349012362347,0,0,0,1.45478927362048,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.513314034281235,0,0,0,0,0,0,0,0.150962843566674,0.540219106755613,0,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51557396436479,1.60778478093707,0,0,0,0,0,0.186224142887574,0.112131862580613,1.2729431655633,0.606351566874658,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.805095174364105,0 | ||
|short_description=p2@F2RL3 | |short_description=p2@F2RL3 | ||
}} | }} |
Latest revision as of 10:44, 16 September 2015
Short description: | p2@F2RL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_F2RL3_5end |
Coexpression cluster: | C3762_leukemia_acute_Mast_chronic_Endothelial_lung_biphenotypic |
Association with transcript: | 76bp_to_ENST00000248076, NM_003950, uc002nfa.2_5end |
EntrezGene: | F2RL3 |
HGNC: | 3540 |
UniProt: | Q96RI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 6.20e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 6.20e-13 | 3 |
endothelium of capillary | 6.20e-13 | 3 |
capillary | 6.20e-13 | 3 |
lower lobe of right lung | 3.71e-10 | 1 |
right lung lobe | 3.71e-10 | 1 |
lower lobe of lung | 3.71e-10 | 1 |
lobe of lung | 3.71e-10 | 1 |
right lung | 3.71e-10 | 1 |
heart left ventricle | 8.24e-10 | 1 |
cardiac ventricle | 8.24e-10 | 1 |
future cardiac ventricle | 8.24e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.46e-22 | 31 |
leukemia | 4.95e-17 | 39 |
hematologic cancer | 1.01e-12 | 51 |
immune system cancer | 1.01e-12 | 51 |
chronic leukemia | 1.21e-10 | 8 |
chronic myeloid leukemia | 3.10e-10 | 1 |