FFCP PHASE1:Hg19::chr19:13953319..13953321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13953319..13953321,- | |||
|coexpression_cluster_id=C1397 | |||
|description=CAGE_peak_at_chr19:13953319..13953321,- | |description=CAGE_peak_at_chr19:13953319..13953321,- | ||
|id=chr19:13953319..13953321,- | |id=chr19:13953319..13953321,- | ||
|ontology_enrichment_celltype=CL:0002274!2.97e-16!5;CL:0000457!2.97e-16!5;CL:0002191!2.97e-16!5;CL:0000097!2.97e-16!5;CL:0000831!2.97e-16!5;CL:0002028!2.97e-16!5;CL:0000766!9.69e-14!76;CL:0000839!1.58e-12!70;CL:0000738!2.01e-12!140;CL:0000557!2.50e-12!71;CL:0002057!1.16e-11!42;CL:0000860!8.12e-11!45;CL:0002031!1.13e-10!124;CL:0000037!1.35e-09!172;CL:0000566!1.35e-09!172;CL:0000163!2.93e-09!9;CL:0000988!6.46e-09!182;CL:0002032!9.82e-09!165;CL:0000837!9.82e-09!165;CL:0000763!1.04e-08!112;CL:0000049!1.04e-08!112;CL:0002087!6.30e-08!119;CL:0002194!2.70e-07!63;CL:0000576!2.70e-07!63;CL:0000040!2.70e-07!63;CL:0000559!2.70e-07!63;CL:0002009!4.82e-07!65 | |ontology_enrichment_celltype=CL:0002274!2.97e-16!5;CL:0000457!2.97e-16!5;CL:0002191!2.97e-16!5;CL:0000097!2.97e-16!5;CL:0000831!2.97e-16!5;CL:0002028!2.97e-16!5;CL:0000766!9.69e-14!76;CL:0000839!1.58e-12!70;CL:0000738!2.01e-12!140;CL:0000557!2.50e-12!71;CL:0002057!1.16e-11!42;CL:0000860!8.12e-11!45;CL:0002031!1.13e-10!124;CL:0000037!1.35e-09!172;CL:0000566!1.35e-09!172;CL:0000163!2.93e-09!9;CL:0000988!6.46e-09!182;CL:0002032!9.82e-09!165;CL:0000837!9.82e-09!165;CL:0000763!1.04e-08!112;CL:0000049!1.04e-08!112;CL:0002087!6.30e-08!119;CL:0002194!2.70e-07!63;CL:0000576!2.70e-07!63;CL:0000040!2.70e-07!63;CL:0000559!2.70e-07!63;CL:0002009!4.82e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.60e-71;5!CL:0000163;5.31e-40;9!CL:0000775;1.22e-14;3!CL:0000151;9.45e-11;36!CL:0000766;4.70e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.09e-71,5;CL:0002028,4.09e-71,5;CL:0000163,4.97e-40,9;CL:0000775,1.22e-14,3;CL:0000766,3.42e-14,72;CL:0000151,1.05e-10,36;CL:0000839,4.06e-10,66;CL:0000557,5.60e-10,67;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.81e-11!102;UBERON:0003061!1.81e-11!102;UBERON:0002371!9.32e-11!80;UBERON:0002193!2.97e-10!112;UBERON:0001474!6.86e-10!86;UBERON:0004765!7.72e-10!101;UBERON:0001434!7.72e-10!101;UBERON:0002405!2.36e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!1.81e-11!102;UBERON:0003061!1.81e-11!102;UBERON:0002371!9.32e-11!80;UBERON:0002193!2.97e-10!112;UBERON:0001474!6.86e-10!86;UBERON:0004765!7.72e-10!101;UBERON:0001434!7.72e-10!101;UBERON:0002405!2.36e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.93e-09,76;UBERON:0001474,2.75e-08,82;UBERON:0004765,1.31e-07,90;UBERON:0002405,2.19e-07,93;UBERON:0002390,4.84e-07,98;UBERON:0003061,4.84e-07,98;UBERON:0001434,6.51e-07,100 | |||
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|short_description=p@chr19:13953319..13953321,- | |short_description=p@chr19:13953319..13953321,- | ||
}} | }} |
Latest revision as of 04:10, 26 July 2015
Short description: | p@chr19:13953319..13953321, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13953319..13953321, - |
Coexpression cluster: | C1397_Mast_Neutrophils_Monocytederived_Macrophage_leiomyoma_Adipocyte_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.09e-71 | 5 |
basophil mast progenitor cell | 4.09e-71 | 5 |
endocrine cell | 4.97e-40 | 9 |
neutrophil | 1.22e-14 | 3 |
myeloid leukocyte | 3.42e-14 | 72 |
secretory cell | 1.05e-10 | 36 |
myeloid lineage restricted progenitor cell | 4.06e-10 | 66 |
granulocyte monocyte progenitor cell | 5.60e-10 | 67 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.93e-09 | 76 |
bone element | 2.75e-08 | 82 |
skeletal element | 1.31e-07 | 90 |
immune system | 2.19e-07 | 93 |
hematopoietic system | 4.84e-07 | 98 |
blood island | 4.84e-07 | 98 |
skeletal system | 6.51e-07 | 100 |