FFCP PHASE1:Hg19::chr19:13229126..13229137,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112939 | |EntrezGene=112939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20967 | |HGNC=20967 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RE7 | |UniProt=Q96RE7 | ||
|association_with_transcript=17bp_to_ENST00000292431,NM_052876,uc002mwm.2_5end | |association_with_transcript=17bp_to_ENST00000292431,NM_052876,uc002mwm.2_5end | ||
|cluster_id=chr19:13229126..13229137,+ | |||
|description=CAGE_peak_3_at_NACC1_5end | |description=CAGE_peak_3_at_NACC1_5end | ||
|id=chr19:13229126..13229137,+ | |id=chr19:13229126..13229137,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.03e-12!248;CL:0000220!4.77e-12!246;CL:0000548!7.66e-11!679;CL:0000004!7.66e-11!679;CL:0000255!7.66e-11!679;CL:0000144!1.18e-10!625;CL:0000012!2.97e-10!682;CL:0000222!1.71e-09!119;CL:0000055!1.77e-09!180;CL:0000003!6.62e-09!722;CL:0000680!6.95e-07!57;CL:0000056!6.95e-07!57;CL:0000355!6.95e-07!57;CL:0002371!9.25e-07!591 | |ontology_enrichment_celltype=CL:0002321!1.03e-12!248;CL:0000220!4.77e-12!246;CL:0000548!7.66e-11!679;CL:0000004!7.66e-11!679;CL:0000255!7.66e-11!679;CL:0000144!1.18e-10!625;CL:0000012!2.97e-10!682;CL:0000222!1.71e-09!119;CL:0000055!1.77e-09!180;CL:0000003!6.62e-09!722;CL:0000680!6.95e-07!57;CL:0000056!6.95e-07!57;CL:0000355!6.95e-07!57;CL:0002371!9.25e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002592;3.95e-10;3!CL:0000359;1.88e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,3.51e-10,3;CL:0000359,2.91e-08,32;CL:0002321,8.68e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003498;3.95e-10;3!UBERON:0005985;3.95e-10;3!UBERON:0001621;3.95e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,3.51e-10,3 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0.446961094427288,0,0,1.89515962028049,0,1.22866968250754,2.09340350391728,0.218441372130172,0.527533956456907,0.37129905888014,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.738726348460727,1.22400414746552,0,0.85870796139317,1.23186982565596,1.00434111675842,0.0764134057479513,0.246301768349837,0.157421562627358,0,0,0.154816123316076,1.83884244895785,0.6024118375565,0.739508020333575,0.232401601740905,0,0,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0.376484679085209,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.511450247374121,0,0.50133791063589,0.434539556882471,0,0,0.378139268656271,0.221729397462564,0.614843499851882,0.196468613246569,1.09288586487763,0,1.29818957461873,0.348259474598534,0.797747763113191,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0.825354125820202,0.626984899610432,0.516833518338658,1.06729878806013,0.33472061276467,0.805658634218294,0,0.24406205754817,0.367663080345869,0,0,0,0.225222960966644,1.53316637465883,1.89853131913626,0.366403487860815,0,0,0,0,0.25326102332916,0.794455084879313,0,1.06400514659507,0.560677600142307,1.06748995729705,0.49333509683432,0,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0.421352420106746,0,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0.250237039743928,0.554128230968366,0.438977620880838,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0.900273288253207,0,0.257640540045629,0.18611685633159,0.506328996723799,0.584622030967192,0,0.368199594569197,0.323292113637624,0,0.503760491138201,0.169560592310488,0.193260853163297,0.545492241181669,0.860413786167011,1.21973706129595,1.06023814657188,0.69716365721711,0.725627385107593,1.7662459561294,1.82488679537915,0,0.643240938192885,0,0,0,0.354920400119532,0.337169380156203,0.723033089650446,0.441175890929576,0,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,1.2347220339942,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0,0,0,0,0,0.463721619900307,0.352226082707465,0,1.38895653772983,0.951270761172991,0.790204397959275,0.858486162094873,0.246217006087397,0.702012795417713,0.594524649154913,0.93733833986777,0.839910640994298,0.567100388969546,0.179117045405697,0.290633938513962,0,0,0.968532774145487,0,0,0.25248486685276,0.063497894292169,0.381988425558278,0,1.71072446022705,0,0.300343057843917,0.285826432630578,0.224262168690721,0.43596006883328,0.2933531432838,0.775630294546667,3.57656445851882,0,0.531876233169741,3.12022310734098,0.257207374262142,1.41849132023278,1.5985330740966,0,0.542621605391443,0,0,0,0.791951872933429,2.1100756394171,0,1.19967589418468,0,0,0,1.19812427745791,1.14861935834114,1.42636905040718,0.434343920002738,0.821905290201534,0.716243852959582,0,0.394061520403854,0.431255149719035,0,1.27047312111232,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0.178428988797162,0.315404830067869,0.234282829985426,0.300946099727719,0,0,1.32845119707087,1.47495334833363,0.347534457872331,0.391602314925481,0.686286847621712,0,0,0,0.909382714338778,1.66435439510497,0.30239029332968,0.496215615637554,0.306923946576125,0.280660094433074,0.384417447767103,0,0.482561763430822,0,0.925258162815933,1.42049380250502,0.328508624055237,0,1.16210378459959,0.241718899183244,1.20303882181971,0.184161977871793,0.459257792658427,0.910455840033585,0.524497659837696,0,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,0,1.08378575017541,0,0.254876273045038,0,1.56712328305525,0.219259876645935,0,0.512900250232778,0.984043937099117,0,0,0.640986253728404,0.247528499761764,0.574265537996172,0.650060246036521,1.6068392984416,0.193341436584244,0.770243085573222,0.307007349452259,0.137836572484531,0.322260734604821,0.435050081742686,0.426133137080504,0.712256285173899,0.826424576804891,0.768760269460425,0.255225424989168,0.30347334256665,0.929691098594572,0.31481234683064,0,0.924100740528266,0.532306030317022,0,0.18532421910392,0.429374660225974,1.116475108079,1.2655176988749,0.38126038784765,0.255897791311334,0.42793898803392,0,0.78494864019923,0,0,0.471249609382746,2.62837226045311,3.17020642346017,2.94880919367287,0,0.243713489631284,1.05650146756755,0.272999822815972,0.707027159768564,0,2.75682671773062,0.66343897524122,2.19225442626881,1.15755106853338,0.655894752046633,1.01455188481352,0.30982349809975,1.12678241012897,0,0.294747123039363,1.426684205925,0,0,0.658589785919804,0.379473173765715,0.349934720244983,0,1.34060455107157,1.08890984861323,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0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| ||
|short_description=p3@NACC1 | |short_description=p3@NACC1 | ||
}} | }} |
Latest revision as of 00:27, 16 September 2015
Short description: | p3@NACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NACC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000292431, NM_052876, uc002mwm.2_5end |
EntrezGene: | NACC1 |
HGNC: | 20967 |
UniProt: | Q96RE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 3.51e-10 | 3 |
vascular associated smooth muscle cell | 2.91e-08 | 32 |
embryonic cell | 8.68e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 3.51e-10 | 3 |