FFCP PHASE1:Hg19::chr19:13051628..13051646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13051628..13051646,+ | |||
|coexpression_cluster_id=C603 | |||
|description=CAGE_peak_at_chr19:13051628..13051646,+ | |description=CAGE_peak_at_chr19:13051628..13051646,+ | ||
|id=chr19:13051628..13051646,+ | |id=chr19:13051628..13051646,+ | ||
|ontology_enrichment_celltype=CL:0000548!2.17e-16!679;CL:0000004!2.17e-16!679;CL:0000255!2.17e-16!679;CL:0000055!4.84e-16!180;CL:0000144!4.88e-16!625;CL:0000012!1.25e-15!682;CL:0002371!5.64e-15!591;CL:0000220!1.37e-10!246;CL:0002321!1.62e-10!248;CL:0000222!1.31e-09!119;CL:0000183!1.80e-08!59;CL:0000680!3.34e-08!57;CL:0000056!3.34e-08!57;CL:0000355!3.34e-08!57;CL:0000057!1.26e-07!75;CL:0000187!1.69e-07!54;CL:0000393!2.33e-07!60;CL:0000211!2.33e-07!60;CL:0000003!2.48e-07!722;CL:0000192!2.63e-07!42;CL:0000514!2.63e-07!42 | |ontology_enrichment_celltype=CL:0000548!2.17e-16!679;CL:0000004!2.17e-16!679;CL:0000255!2.17e-16!679;CL:0000055!4.84e-16!180;CL:0000144!4.88e-16!625;CL:0000012!1.25e-15!682;CL:0002371!5.64e-15!591;CL:0000220!1.37e-10!246;CL:0002321!1.62e-10!248;CL:0000222!1.31e-09!119;CL:0000183!1.80e-08!59;CL:0000680!3.34e-08!57;CL:0000056!3.34e-08!57;CL:0000355!3.34e-08!57;CL:0000057!1.26e-07!75;CL:0000187!1.69e-07!54;CL:0000393!2.33e-07!60;CL:0000211!2.33e-07!60;CL:0000003!2.48e-07!722;CL:0000192!2.63e-07!42;CL:0000514!2.63e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.52e-10,250;CL:0000222,4.68e-10,121;CL:0000680,1.20e-08,58;CL:0000056,1.20e-08,58;CL:0000355,1.20e-08,58;CL:0000393,4.59e-08,61;CL:0000211,4.59e-08,61;CL:0000187,6.49e-08,55;CL:0000048,8.26e-08,427;CL:0000192,1.52e-07,43;CL:0000514,1.52e-07,43;CL:0000057,1.67e-07,76;CL:0000723,2.37e-07,433;CL:0000034,4.93e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.59e-10!143;UBERON:0003914!1.18e-07!118;UBERON:0000490!1.65e-07!138;UBERON:0000914!3.30e-07!83;UBERON:0002329!3.30e-07!83;UBERON:0003077!3.30e-07!83;UBERON:0003059!3.30e-07!83;UBERON:0007282!3.30e-07!83;UBERON:0009618!3.30e-07!83;UBERON:0007285!3.30e-07!83;UBERON:0002100!3.74e-07!216;UBERON:0000486!5.63e-07!82;UBERON:0000926!5.74e-07!448;UBERON:0004120!5.74e-07!448;UBERON:0006603!5.74e-07!448;UBERON:0004290!6.34e-07!70 | |ontology_enrichment_uberon=UBERON:0005256!1.59e-10!143;UBERON:0003914!1.18e-07!118;UBERON:0000490!1.65e-07!138;UBERON:0000914!3.30e-07!83;UBERON:0002329!3.30e-07!83;UBERON:0003077!3.30e-07!83;UBERON:0003059!3.30e-07!83;UBERON:0007282!3.30e-07!83;UBERON:0009618!3.30e-07!83;UBERON:0007285!3.30e-07!83;UBERON:0002100!3.74e-07!216;UBERON:0000486!5.63e-07!82;UBERON:0000926!5.74e-07!448;UBERON:0004120!5.74e-07!448;UBERON:0006603!5.74e-07!448;UBERON:0004290!6.34e-07!70 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,4.86e-10,122;UBERON:0003104,3.08e-09,160;UBERON:0009142,3.08e-09,160;UBERON:0007503,3.86e-09,78;UBERON:0000490,3.35e-08,148;UBERON:0003914,8.01e-08,117;UBERON:0007524,1.18e-07,73;UBERON:0002329,1.78e-07,71;UBERON:0003059,1.78e-07,71;UBERON:0007282,1.78e-07,71;UBERON:0004290,1.78e-07,71;UBERON:0009618,1.78e-07,71;UBERON:0003077,2.30e-07,72;UBERON:0007285,2.30e-07,72;UBERON:0000486,2.39e-07,83;UBERON:0001134,4.51e-07,62;UBERON:0002036,4.51e-07,62;UBERON:0003082,4.51e-07,62 | |||
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| ||
|short_description=p@chr19:13051628..13051646,+ | |short_description=p@chr19:13051628..13051646,+ | ||
}} | }} |
Latest revision as of 03:54, 26 July 2015
Short description: | p@chr19:13051628..13051646, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13051628..13051646, + |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.52e-10 | 250 |
mesodermal cell | 4.68e-10 | 121 |
muscle precursor cell | 1.20e-08 | 58 |
myoblast | 1.20e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.20e-08 | 58 |
electrically responsive cell | 4.59e-08 | 61 |
electrically active cell | 4.59e-08 | 61 |
muscle cell | 6.49e-08 | 55 |
multi fate stem cell | 8.26e-08 | 427 |
smooth muscle cell | 1.52e-07 | 43 |
smooth muscle myoblast | 1.52e-07 | 43 |
fibroblast | 1.67e-07 | 76 |
somatic stem cell | 2.37e-07 | 433 |
stem cell | 4.93e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 4.86e-10 | 122 |
mesenchyme | 3.08e-09 | 160 |
entire embryonic mesenchyme | 3.08e-09 | 160 |
epithelial vesicle | 3.86e-09 | 78 |
unilaminar epithelium | 3.35e-08 | 148 |
epithelial tube | 8.01e-08 | 117 |
dense mesenchyme tissue | 1.18e-07 | 73 |
somite | 1.78e-07 | 71 |
presomitic mesoderm | 1.78e-07 | 71 |
presumptive segmental plate | 1.78e-07 | 71 |
dermomyotome | 1.78e-07 | 71 |
trunk paraxial mesoderm | 1.78e-07 | 71 |
paraxial mesoderm | 2.30e-07 | 72 |
presumptive paraxial mesoderm | 2.30e-07 | 72 |
multilaminar epithelium | 2.39e-07 | 83 |
skeletal muscle tissue | 4.51e-07 | 62 |
striated muscle tissue | 4.51e-07 | 62 |
myotome | 4.51e-07 | 62 |