FFCP PHASE1:Hg19::chr19:13051206..13051244,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=811 | |EntrezGene=811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1455 | |HGNC=1455 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_AK130190_5end | |association_with_transcript=51bp_to_AK130190_5end | ||
|cluster_id=chr19:13051206..13051244,+ | |||
|coexpression_cluster_id=C603 | |||
|description=CAGE_peak_5_at_CALR_5end | |description=CAGE_peak_5_at_CALR_5end | ||
|id=chr19:13051206..13051244,+ | |id=chr19:13051206..13051244,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.26e-23!679;CL:0000004!1.26e-23!679;CL:0000255!1.26e-23!679;CL:0000012!1.22e-22!682;CL:0000144!1.86e-21!625;CL:0002371!6.88e-20!591;CL:0000055!2.30e-15!180;CL:0000003!2.16e-12!722;CL:0000723!2.97e-12!436;CL:0000048!4.04e-12!430;CL:0000034!4.36e-12!444;CL:0002321!4.86e-12!248;CL:0000220!6.16e-12!246;CL:0000222!1.42e-10!119;CL:0000063!5.33e-10!578;CL:0000183!1.15e-08!59;CL:0000057!1.18e-08!75;CL:0000393!2.73e-08!60;CL:0000211!2.73e-08!60;CL:0000680!3.30e-08!57;CL:0000056!3.30e-08!57;CL:0000355!3.30e-08!57;CL:0000192!4.70e-08!42;CL:0000514!4.70e-08!42;CL:0000187!1.02e-07!54 | |ontology_enrichment_celltype=CL:0000548!1.26e-23!679;CL:0000004!1.26e-23!679;CL:0000255!1.26e-23!679;CL:0000012!1.22e-22!682;CL:0000144!1.86e-21!625;CL:0002371!6.88e-20!591;CL:0000055!2.30e-15!180;CL:0000003!2.16e-12!722;CL:0000723!2.97e-12!436;CL:0000048!4.04e-12!430;CL:0000034!4.36e-12!444;CL:0002321!4.86e-12!248;CL:0000220!6.16e-12!246;CL:0000222!1.42e-10!119;CL:0000063!5.33e-10!578;CL:0000183!1.15e-08!59;CL:0000057!1.18e-08!75;CL:0000393!2.73e-08!60;CL:0000211!2.73e-08!60;CL:0000680!3.30e-08!57;CL:0000056!3.30e-08!57;CL:0000355!3.30e-08!57;CL:0000192!4.70e-08!42;CL:0000514!4.70e-08!42;CL:0000187!1.02e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.59e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,4.09e-12,433;CL:0000034,5.34e-12,441;CL:0002321,5.37e-12,250;CL:0000048,5.53e-12,427;CL:0000222,1.55e-10,121;CL:0000057,1.33e-08,76;CL:0000393,9.57e-08,61;CL:0000211,9.57e-08,61;CL:0000680,1.03e-07,58;CL:0000056,1.03e-07,58;CL:0000355,1.03e-07,58;CL:0000192,1.97e-07,43;CL:0000514,1.97e-07,43;CL:0000187,3.16e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.63e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.55e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.12e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.19e-09!143;UBERON:0000914!7.62e-09!83;UBERON:0002329!7.62e-09!83;UBERON:0003077!7.62e-09!83;UBERON:0003059!7.62e-09!83;UBERON:0007282!7.62e-09!83;UBERON:0009618!7.62e-09!83;UBERON:0007285!7.62e-09!83;UBERON:0004290!9.24e-09!70;UBERON:0000486!1.89e-08!82;UBERON:0003914!2.53e-08!118;UBERON:0000490!4.70e-08!138;UBERON:0001637!1.17e-07!42;UBERON:0003509!1.17e-07!42;UBERON:0004572!1.17e-07!42;UBERON:0001134!2.22e-07!61;UBERON:0002036!2.22e-07!61;UBERON:0003082!2.22e-07!61;UBERON:0002049!3.25e-07!79;UBERON:0007798!3.25e-07!79;UBERON:0004872!6.39e-07!84;UBERON:0002385!8.03e-07!63;UBERON:0001015!8.03e-07!63;UBERON:0000383!8.03e-07!63 | |ontology_enrichment_uberon=UBERON:0005256!1.19e-09!143;UBERON:0000914!7.62e-09!83;UBERON:0002329!7.62e-09!83;UBERON:0003077!7.62e-09!83;UBERON:0003059!7.62e-09!83;UBERON:0007282!7.62e-09!83;UBERON:0009618!7.62e-09!83;UBERON:0007285!7.62e-09!83;UBERON:0004290!9.24e-09!70;UBERON:0000486!1.89e-08!82;UBERON:0003914!2.53e-08!118;UBERON:0000490!4.70e-08!138;UBERON:0001637!1.17e-07!42;UBERON:0003509!1.17e-07!42;UBERON:0004572!1.17e-07!42;UBERON:0001134!2.22e-07!61;UBERON:0002036!2.22e-07!61;UBERON:0003082!2.22e-07!61;UBERON:0002049!3.25e-07!79;UBERON:0007798!3.25e-07!79;UBERON:0004872!6.39e-07!84;UBERON:0002385!8.03e-07!63;UBERON:0001015!8.03e-07!63;UBERON:0000383!8.03e-07!63 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.12e-09,78;UBERON:0005256,2.69e-09,122;UBERON:0000490,4.27e-09,148;UBERON:0003914,1.12e-08,117;UBERON:0002329,2.65e-08,71;UBERON:0003059,2.65e-08,71;UBERON:0007282,2.65e-08,71;UBERON:0004290,2.65e-08,71;UBERON:0009618,2.65e-08,71;UBERON:0007524,3.88e-08,73;UBERON:0000486,5.51e-08,83;UBERON:0003077,6.04e-08,72;UBERON:0007285,6.04e-08,72;UBERON:0001637,1.08e-07,42;UBERON:0003509,1.08e-07,42;UBERON:0004572,1.08e-07,42;UBERON:0000926,1.41e-07,315;UBERON:0004120,1.41e-07,315;UBERON:0006603,1.41e-07,315;UBERON:0002049,3.41e-07,78;UBERON:0007798,3.41e-07,78;UBERON:0001134,6.15e-07,62;UBERON:0002036,6.15e-07,62;UBERON:0003082,6.15e-07,62;UBERON:0004872,8.49e-07,83 | |||
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| ||
|short_description=p5@CALR | |short_description=p5@CALR | ||
}} | }} |
Latest revision as of 22:17, 15 September 2015
Short description: | p5@CALR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CALR_5end |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | 51bp_to_AK130190_5end |
EntrezGene: | CALR |
HGNC: | 1455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 4.09e-12 | 433 |
stem cell | 5.34e-12 | 441 |
embryonic cell | 5.37e-12 | 250 |
multi fate stem cell | 5.53e-12 | 427 |
mesodermal cell | 1.55e-10 | 121 |
fibroblast | 1.33e-08 | 76 |
electrically responsive cell | 9.57e-08 | 61 |
electrically active cell | 9.57e-08 | 61 |
muscle precursor cell | 1.03e-07 | 58 |
myoblast | 1.03e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.03e-07 | 58 |
smooth muscle cell | 1.97e-07 | 43 |
smooth muscle myoblast | 1.97e-07 | 43 |
muscle cell | 3.16e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.12e-09 | 78 |
trunk mesenchyme | 2.69e-09 | 122 |
unilaminar epithelium | 4.27e-09 | 148 |
epithelial tube | 1.12e-08 | 117 |
somite | 2.65e-08 | 71 |
presomitic mesoderm | 2.65e-08 | 71 |
presumptive segmental plate | 2.65e-08 | 71 |
dermomyotome | 2.65e-08 | 71 |
trunk paraxial mesoderm | 2.65e-08 | 71 |
dense mesenchyme tissue | 3.88e-08 | 73 |
multilaminar epithelium | 5.51e-08 | 83 |
paraxial mesoderm | 6.04e-08 | 72 |
presumptive paraxial mesoderm | 6.04e-08 | 72 |
artery | 1.08e-07 | 42 |
arterial blood vessel | 1.08e-07 | 42 |
arterial system | 1.08e-07 | 42 |
mesoderm | 1.41e-07 | 315 |
mesoderm-derived structure | 1.41e-07 | 315 |
presumptive mesoderm | 1.41e-07 | 315 |
vasculature | 3.41e-07 | 78 |
vascular system | 3.41e-07 | 78 |
skeletal muscle tissue | 6.15e-07 | 62 |
striated muscle tissue | 6.15e-07 | 62 |
myotome | 6.15e-07 | 62 |
splanchnic layer of lateral plate mesoderm | 8.49e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.12e-07 | 14 |