FFCP PHASE1:Hg19::chr2:27669034..27669075,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26160 | |EntrezGene=26160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30391 | |HGNC=30391 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000479419,ENST00000494163_5end | |association_with_transcript=0bp_to_ENST00000479419,ENST00000494163_5end | ||
|cluster_id=chr2:27669034..27669075,- | |||
|coexpression_cluster_id=C1048 | |||
|description=CAGE_peak_3_at_IFT172_5end | |description=CAGE_peak_3_at_IFT172_5end | ||
|id=chr2:27669034..27669075,- | |id=chr2:27669034..27669075,- | ||
|ontology_enrichment_celltype=CL:0002076!1.18e-20!43;CL:0000223!2.53e-14!59;CL:0000066!3.81e-14!254;CL:0002251!4.20e-09!21;CL:0002368!1.05e-08!13;CL:0002202!2.46e-08!9;CL:0002632!2.46e-08!9;CL:0000244!2.28e-07!4;CL:0000731!2.28e-07!4;CL:0002327!5.95e-07!4;CL:0002621!9.19e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.18e-20!43;CL:0000223!2.53e-14!59;CL:0000066!3.81e-14!254;CL:0002251!4.20e-09!21;CL:0002368!1.05e-08!13;CL:0002202!2.46e-08!9;CL:0002632!2.46e-08!9;CL:0000244!2.28e-07!4;CL:0000731!2.28e-07!4;CL:0002327!5.95e-07!4;CL:0002621!9.19e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;4.17e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.57e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.69e-07;10!UBERON:0005564;1.69e-07;10!UBERON:0006595;5.94e-07;86 | |||
|ontology_enrichment_disease=DOID:1749!4.26e-10!14;DOID:305!2.65e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.13e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.67e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.45e-23!169;UBERON:0000925!8.45e-23!169;UBERON:0006595!8.45e-23!169;UBERON:0001007!5.53e-20!155;UBERON:0001555!5.53e-20!155;UBERON:0007026!5.53e-20!155;UBERON:0004921!5.03e-16!129;UBERON:0004185!5.03e-16!129;UBERON:0000464!1.05e-13!104;UBERON:0001004!2.57e-13!72;UBERON:0000466!1.04e-12!126;UBERON:0005911!2.62e-12!82;UBERON:0005153!1.95e-11!37;UBERON:0000161!2.36e-11!35;UBERON:0000077!5.26e-11!130;UBERON:0005178!1.08e-10!34;UBERON:0002224!1.08e-10!34;UBERON:0005181!2.94e-10!35;UBERON:0005157!6.07e-09!51;UBERON:0002294!1.18e-08!7;UBERON:0001173!1.18e-08!7;UBERON:0004912!1.18e-08!7;UBERON:0007196!1.22e-08!14;UBERON:0001558!1.22e-08!14;UBERON:0000365!1.37e-08!5;UBERON:0000062!2.35e-08!511;UBERON:0000166!4.17e-08!21;UBERON:0005156!4.87e-08!59;UBERON:0000990!4.87e-08!59;UBERON:0001041!5.84e-08!98;UBERON:0000065!9.37e-08!53;UBERON:0003729!1.50e-07!5;UBERON:0005177!2.14e-07!107;UBERON:0000344!2.36e-07!12;UBERON:0000974!3.13e-07!10;UBERON:0002048!3.56e-07!22;UBERON:0000117!3.56e-07!22;UBERON:0000171!3.56e-07!22;UBERON:0000170!3.56e-07!22;UBERON:0005597!3.56e-07!22;UBERON:0000118!3.56e-07!22;UBERON:0001008!3.67e-07!45;UBERON:0005910!4.46e-07!6;UBERON:0003133!5.32e-07!48;UBERON:0001911!5.95e-07!4;UBERON:0005333!5.95e-07!4;UBERON:0008425!5.95e-07!4;UBERON:0005311!5.95e-07!4;UBERON:0008947!8.19e-07!38;UBERON:0003258!8.19e-07!38;UBERON:0001949!9.19e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;9.72e-21;33!UBERON:0005409;2.73e-18;22!UBERON:0000160;1.83e-15;17!UBERON:0002108;3.57e-15;4!UBERON:0001949;4.17e-14;3!UBERON:0001555;5.23e-13;54!UBERON:0003127;2.27e-10;2!UBERON:0000341;3.60e-10;2!UBERON:0001829;8.51e-10;2!UBERON:0000473;2.31e-09;8!UBERON:0001155;1.34e-08;9!UBERON:0001007;5.05e-08;81!UBERON:0000161;7.86e-08;19!UBERON:0000166;7.86e-08;19!UBERON:0001041;1.17e-07;14!UBERON:0000059;4.89e-07;11!UBERON:0002114;6.45e-07;2!UBERON:0003135;8.08e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.90e-16,25;UBERON:0000160,1.96e-15,17;UBERON:0002108,4.36e-15,4;UBERON:0001949,3.57e-14,3;UBERON:0001007,2.76e-12,145;UBERON:0001555,2.76e-12,145;UBERON:0007026,2.76e-12,145;UBERON:0004119,9.13e-12,160;UBERON:0000925,9.13e-12,160;UBERON:0006595,9.13e-12,160;UBERON:0004921,1.43e-10,118;UBERON:0003127,2.32e-10,2;UBERON:0000341,4.23e-10,2;UBERON:0001829,5.81e-10,2;UBERON:0000473,2.36e-09,8;UBERON:0001155,1.29e-08,9;UBERON:0000059,4.74e-07,11;UBERON:0002114,7.38e-07,2;UBERON:0003135,8.21e-07,11;UBERON:0000166,8.88e-07,22 | |||
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| ||
|short_description=p3@IFT172 | |short_description=p3@IFT172 | ||
}} | }} |
Latest revision as of 17:32, 16 September 2015
Short description: | p3@IFT172 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IFT172_5end |
Coexpression cluster: | C1048_signet_small_colon_duodenum_temporal_trachea_gall |
Association with transcript: | 0bp_to_ENST00000479419, ENST00000494163_5end |
EntrezGene: | IFT172 |
HGNC: | 30391 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.57e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.90e-16 | 25 |
intestine | 1.96e-15 | 17 |
small intestine | 4.36e-15 | 4 |
gingival epithelium | 3.57e-14 | 3 |
digestive system | 2.76e-12 | 145 |
digestive tract | 2.76e-12 | 145 |
primitive gut | 2.76e-12 | 145 |
endoderm-derived structure | 9.13e-12 | 160 |
endoderm | 9.13e-12 | 160 |
presumptive endoderm | 9.13e-12 | 160 |
subdivision of digestive tract | 1.43e-10 | 118 |
open tracheal system trachea | 2.32e-10 | 2 |
throat | 4.23e-10 | 2 |
major salivary gland | 5.81e-10 | 2 |
testis | 2.36e-09 | 8 |
colon | 1.29e-08 | 9 |
large intestine | 4.74e-07 | 11 |
duodenum | 7.38e-07 | 2 |
male reproductive organ | 8.21e-07 | 11 |
oral opening | 8.88e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.67e-10 | 2 |