FFCP PHASE1:Hg19::chr2:235860690..235860708,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23677 | |EntrezGene=23677 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10826 | |HGNC=10826 | ||
|TSSclassifier=strong | |||
|UniProt=C9JF25 | |UniProt=C9JF25 | ||
|association_with_transcript=-11bp_to_,11bp_to_ENST00000416021,ENST00000484097_5end | |association_with_transcript=-11bp_to_,11bp_to_ENST00000416021,ENST00000484097_5end | ||
|cluster_id=chr2:235860690..235860708,+ | |||
|description=CAGE_peak_2_at_SH3BP4_5end | |description=CAGE_peak_2_at_SH3BP4_5end | ||
|id=chr2:235860690..235860708,+ | |id=chr2:235860690..235860708,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.93e-25!180;CL:0002321!5.65e-21!248;CL:0000220!5.91e-21!246;CL:0000222!1.81e-15!119;CL:0000057!2.35e-14!75;CL:0000183!3.82e-09!59;CL:0000680!7.46e-09!57;CL:0000056!7.46e-09!57;CL:0000355!7.46e-09!57;CL:0000192!9.50e-09!42;CL:0000514!9.50e-09!42;CL:0000187!2.14e-08!54;CL:0000393!2.78e-08!60;CL:0000211!2.78e-08!60;CL:0000359!3.04e-07!32 | |ontology_enrichment_celltype=CL:0000055!1.93e-25!180;CL:0002321!5.65e-21!248;CL:0000220!5.91e-21!246;CL:0000222!1.81e-15!119;CL:0000057!2.35e-14!75;CL:0000183!3.82e-09!59;CL:0000680!7.46e-09!57;CL:0000056!7.46e-09!57;CL:0000355!7.46e-09!57;CL:0000192!9.50e-09!42;CL:0000514!9.50e-09!42;CL:0000187!2.14e-08!54;CL:0000393!2.78e-08!60;CL:0000211!2.78e-08!60;CL:0000359!3.04e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.17e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.38e-20,250;CL:0000222,1.36e-15,121;CL:0000057,1.18e-14,76;CL:0000680,7.97e-09,58;CL:0000056,7.97e-09,58;CL:0000355,7.97e-09,58;CL:0000192,1.12e-08,43;CL:0000514,1.12e-08,43;CL:0000187,2.31e-08,55;CL:0000393,2.91e-08,61;CL:0000211,2.91e-08,61;CL:0000359,2.58e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.09e-26!365;UBERON:0000477!2.00e-20!286;UBERON:0000468!2.17e-20!659;UBERON:0000483!6.60e-20!309;UBERON:0000119!1.20e-19!312;UBERON:0004111!8.70e-19!241;UBERON:0003914!9.86e-18!118;UBERON:0000467!2.06e-17!625;UBERON:0000480!4.63e-17!626;UBERON:0000481!7.29e-17!347;UBERON:0000025!7.45e-16!194;UBERON:0005256!1.14e-15!143;UBERON:0002100!5.82e-15!216;UBERON:0000490!1.33e-13!138;UBERON:0002049!1.43e-13!79;UBERON:0007798!1.43e-13!79;UBERON:0000922!7.04e-12!612;UBERON:0002050!1.30e-11!605;UBERON:0005423!1.30e-11!605;UBERON:0000923!1.70e-11!604;UBERON:0005291!1.70e-11!604;UBERON:0006598!1.70e-11!604;UBERON:0002532!1.70e-11!604;UBERON:0000914!3.37e-11!83;UBERON:0002329!3.37e-11!83;UBERON:0003077!3.37e-11!83;UBERON:0003059!3.37e-11!83;UBERON:0007282!3.37e-11!83;UBERON:0009618!3.37e-11!83;UBERON:0007285!3.37e-11!83;UBERON:0001981!6.58e-11!60;UBERON:0007500!6.58e-11!60;UBERON:0004537!6.58e-11!60;UBERON:0006965!6.58e-11!60;UBERON:0001637!6.65e-11!42;UBERON:0003509!6.65e-11!42;UBERON:0004572!6.65e-11!42;UBERON:0000055!7.30e-11!69;UBERON:0004872!1.07e-09!84;UBERON:0003104!1.12e-09!238;UBERON:0009142!1.12e-09!238;UBERON:0004573!3.26e-09!33;UBERON:0004571!3.26e-09!33;UBERON:0004290!5.04e-09!70;UBERON:0000062!7.99e-09!511;UBERON:0000033!3.91e-08!123;UBERON:0001134!5.26e-08!61;UBERON:0002036!5.26e-08!61;UBERON:0003082!5.26e-08!61;UBERON:0004121!5.29e-08!169;UBERON:0000064!5.36e-08!219;UBERON:0000947!1.06e-07!21;UBERON:0010191!1.06e-07!21;UBERON:0000466!1.18e-07!126;UBERON:0004535!1.27e-07!110;UBERON:0000924!1.27e-07!173;UBERON:0006601!1.27e-07!173;UBERON:0000486!1.96e-07!82;UBERON:0002385!2.05e-07!63;UBERON:0001015!2.05e-07!63;UBERON:0000383!2.05e-07!63;UBERON:0003102!2.34e-07!95;UBERON:0001048!2.82e-07!168;UBERON:0000153!7.04e-07!129;UBERON:0007811!7.04e-07!129;UBERON:0001009!7.72e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.46e-09;42!UBERON:0003509;7.46e-09;42!UBERON:0004572;7.46e-09;42!UBERON:0004573;1.45e-08;33!UBERON:0004571;1.45e-08;33!UBERON:0003914;8.51e-08;74!UBERON:0000947;8.86e-08;21!UBERON:0010191;8.86e-08;21!UBERON:0007500;1.85e-07;56!UBERON:0001981;1.85e-07;56!UBERON:0004537;1.85e-07;56 | |||
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|short_description=p2@SH3BP4 | |short_description=p2@SH3BP4 | ||
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Latest revision as of 01:30, 16 September 2015
Short description: | p2@SH3BP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SH3BP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_, 11bp_to_ENST00000416021, ENST00000484097_5end |
EntrezGene: | SH3BP4 |
HGNC: | 10826 |
UniProt: | C9JF25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.38e-20 | 250 |
mesodermal cell | 1.36e-15 | 121 |
fibroblast | 1.18e-14 | 76 |
muscle precursor cell | 7.97e-09 | 58 |
myoblast | 7.97e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.97e-09 | 58 |
smooth muscle cell | 1.12e-08 | 43 |
smooth muscle myoblast | 1.12e-08 | 43 |
muscle cell | 2.31e-08 | 55 |
electrically responsive cell | 2.91e-08 | 61 |
electrically active cell | 2.91e-08 | 61 |
vascular associated smooth muscle cell | 2.58e-07 | 32 |