FFCP PHASE1:Hg19::chr2:224840275..224840339,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5270 | |EntrezGene=5270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8951 | |HGNC=8951 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_AJ293400_5end | |association_with_transcript=42bp_to_AJ293400_5end | ||
|cluster_id=chr2:224840275..224840339,- | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_6_at_SERPINE2_5end | |description=CAGE_peak_6_at_SERPINE2_5end | ||
|id=chr2:224840275..224840339,- | |id=chr2:224840275..224840339,- | ||
|ontology_enrichment_celltype=CL:0000055!9.75e-14!180;CL:0000057!1.87e-11!75 | |ontology_enrichment_celltype=CL:0000055!9.75e-14!180;CL:0000057!1.87e-11!75 | ||
|ontology_enrichment_celltype_v019=CL:0000153;4.84e-09;9!CL:0000447;4.84e-09;9!CL:0000138;3.71e-07;6!CL:0000499;7.40e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.87e-09,9;CL:0000447,4.87e-09,9;CL:0000057,8.06e-08,76;CL:0000058,4.00e-07,6;CL:0000138,4.00e-07,6;CL:0000499,7.07e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.34e-12!365;UBERON:0001049!7.29e-12!57;UBERON:0005068!7.29e-12!57;UBERON:0006241!7.29e-12!57;UBERON:0007135!7.29e-12!57;UBERON:0002020!4.68e-10!34;UBERON:0003528!4.68e-10!34;UBERON:0000955!7.12e-10!69;UBERON:0006238!7.12e-10!69;UBERON:0003080!7.79e-10!42;UBERON:0001017!1.31e-09!82;UBERON:0002780!1.73e-09!41;UBERON:0001890!1.73e-09!41;UBERON:0006240!1.73e-09!41;UBERON:0002616!3.56e-09!59;UBERON:0000073!1.43e-08!94;UBERON:0001016!1.43e-08!94;UBERON:0001869!1.93e-08!32;UBERON:0005743!2.16e-08!86;UBERON:0001893!2.38e-08!34;UBERON:0002791!2.61e-08!33;UBERON:0002619!7.74e-08!22;UBERON:0000025!2.80e-07!194;UBERON:0004111!3.00e-07!241;UBERON:0000468!7.52e-07!659;UBERON:0003075!7.63e-07!86;UBERON:0007284!7.63e-07!86;UBERON:0002346!8.58e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.81e-09;9!UBERON:0000042;1.81e-09;9!UBERON:0002619;3.04e-08;22!UBERON:0003528;7.12e-08;34!UBERON:0002020;7.12e-08;34!UBERON:0003688;1.29e-07;6!UBERON:0002358;1.29e-07;6!UBERON:0003684;1.29e-07;6!UBERON:0001178;1.29e-07;6!UBERON:0002791;1.96e-07;32!UBERON:0000956;5.76e-07;25!UBERON:0000203;5.76e-07;25!UBERON:0001869;8.65e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.58e-10,34;UBERON:0002020,6.58e-10,34;UBERON:0001049,9.65e-09,56;UBERON:0005068,9.65e-09,56;UBERON:0006241,9.65e-09,56;UBERON:0007135,9.65e-09,56;UBERON:0000073,1.70e-08,53;UBERON:0002616,1.70e-08,53;UBERON:0002619,3.03e-08,22;UBERON:0002791,5.62e-08,32;UBERON:0000955,1.20e-07,68;UBERON:0006238,1.20e-07,68;UBERON:0002780,1.66e-07,41;UBERON:0001890,1.66e-07,41;UBERON:0003080,1.66e-07,41;UBERON:0006240,1.66e-07,41;UBERON:0003688,1.82e-07,6;UBERON:0002358,1.82e-07,6;UBERON:0003684,1.82e-07,6;UBERON:0001178,1.82e-07,6;UBERON:0001893,2.59e-07,34;UBERON:0000956,5.75e-07,25;UBERON:0000203,5.75e-07,25;UBERON:0001869,6.13e-07,32;UBERON:0001017,6.67e-07,81 | |||
|phase1_expression=1.45342703416445,0.642301571672949,0.563817616383885,2.00146596706261,1.34088328328186,9.59572376510406,0,0,0,0,0,0,0,0.37129905888014,0.994192127183747,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,1.80719576192283,1.00267582127178,2.60723734129483,2.3858578411533,7.78615792484217,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8304292949378,2.27934920996244,0.926864265692532,18.3575437279241,1.41867352879343,0.560677600142307,1.06748995729705,0.74000264525148,0,0,0,0.151357427644931,0,0,0,0,1.34503812496621,0,0,0,0.408308342509787,0.245668634623536,0.103325781175765,0,1.97813543422845,0.910161361938026,0,0.168336113954066,0,0,0.438977620880838,0.612975591598039,3.15499923703853,0.226864366320042,4.48474089222155,0.85422955527427,0.847727604638247,3.60109315301283,0.824420233907511,3.34932702059318,0.930584281657949,1.85653965465393,0.584622030967192,1.51460264546469,1.38074847963449,0.646584227275248,7.4552014428489,0.604512589365842,0.339121184620975,0.57978255948989,0.545492241181669,0.573609190778008,0.243947412259191,0,0.232387885739037,0.310983165046111,0.756962552626885,0,3.12899064659632,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.703702806881416,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0,0,0,0,0,0,0,0,0,0,0,0.719792448923265,0.901029173531752,0.285826432630578,0,0,0,1.55126058909333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,5.70547620162874,2.75084482668401,3.6985738059069,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,1.08506009479894,0.415941723061614,1.42743191037729,1.41932173530541,2.10854546986884,0,0,0,0,0,2.86715927744673,0,0,0,0,0,0,0,0,4.46594054073798,0.460385919864187,1.40330047216537,4.61300937320523,2.04682899626681,13.0291676126322,13.3576259800492,0.154209693802656,0.532685175939381,0.0821271560138091,0,0,0,0.601519410909855,0.184161977871793,0.229628896329213,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0.366277859273374,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0.768760269460425,0.127612712494584,0.4046311234222,1.39453664789186,9.75918275174984,1.3940745403212,0.616067160352178,0.532306030317022,0.869932992075073,0.37064843820784,1.00187420719394,0,0,0,0,0,0.636406495851874,0,0.359744915166629,0.54907405947211,0.471249609382746,1.41527737101321,0,1.68503382495592,0,1.46228093778771,0,0.136499911407986,0.989838023675989,0,1.65409603063837,0.66343897524122,2.63070531152258,0,0,0.202910376962704,0.30982349809975,0.845086807596724,0,0.294747123039363,0,0,5.9110137883346,3.62224382255892,0,0,0.288666338176536,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0.635020748171649,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,1.67121139316383,0,0,0.994147647766298,1.54736358051564,0.111308705022906,0,0,0.19924798825107,0,0,0,0,1.55519793830904,0,0,0,0,0,0,1.93866549219044,0.649376687132959,1.99613798001194,0,0,0.724999575434793,0.227586896570999,0,0.472775363535873,0.344743373241465,0,0,2.65722415744152,0.241192877250816,0,0.221158519862449,0.591095237907095,1.53569778007781,0,0.139423744278603,0.230850775511391,0.113942055847001,0,0,0,5.42301971544263,1.28236630762607,43.1758168575094,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0,1.22206028986725,0.296521128680622,0.123563938946503,0,0,0,0.702793337176017,0,0,0,0,2.41981432097328,0.30607276163049,0.189559738885464,0,0.103688191397247,0.664653872707185,0.661983911750998,0.627865836814451,1.19472429772959,0,0.416024019039416,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.411125773940253,0.993573058514948,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0.171594997861965,0.14405479798815,0.124252535565433,0,1.63085047288337,0.313808538937,0.101998217636322,0,0.600420288709789,1.50595916781192,0,1.71906176567983,0,1.11712960508902,0.687481272035051,20.1004446881508,0,0,0.223171457441873,0,12.9707958075265,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,5.56660782866512,2.04305109167363,0.482259445395058,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0.105600336519406,1.25501137532991,0.383830394638891,3.57347663186684,2.64836788146173,0,1.08599920350743,0.864221491201268,2.28611152076586,0,0,0.170388021785422,0.226624183040251,0,0,10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| ||
|short_description=p6@SERPINE2 | |short_description=p6@SERPINE2 | ||
}} | }} |
Latest revision as of 00:43, 25 September 2015
Short description: | p6@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 42bp_to_AJ293400_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.87e-09 | 9 |
carbohydrate secreting cell | 4.87e-09 | 9 |
fibroblast | 8.06e-08 | 76 |
chondroblast | 4.00e-07 | 6 |
chondrocyte | 4.00e-07 | 6 |
stromal cell | 7.07e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 6.58e-10 | 34 |
gray matter | 6.58e-10 | 34 |
neural tube | 9.65e-09 | 56 |
neural rod | 9.65e-09 | 56 |
future spinal cord | 9.65e-09 | 56 |
neural keel | 9.65e-09 | 56 |
regional part of nervous system | 1.70e-08 | 53 |
regional part of brain | 1.70e-08 | 53 |
regional part of cerebral cortex | 3.03e-08 | 22 |
regional part of telencephalon | 5.62e-08 | 32 |
brain | 1.20e-07 | 68 |
future brain | 1.20e-07 | 68 |
regional part of forebrain | 1.66e-07 | 41 |
forebrain | 1.66e-07 | 41 |
anterior neural tube | 1.66e-07 | 41 |
future forebrain | 1.66e-07 | 41 |
omentum | 1.82e-07 | 6 |
peritoneum | 1.82e-07 | 6 |
abdominal cavity | 1.82e-07 | 6 |
visceral peritoneum | 1.82e-07 | 6 |
telencephalon | 2.59e-07 | 34 |
cerebral cortex | 5.75e-07 | 25 |
pallium | 5.75e-07 | 25 |
cerebral hemisphere | 6.13e-07 | 32 |
central nervous system | 6.67e-07 | 81 |