FFCP PHASE1:Hg19::chr2:220492344..220492368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6508 | |EntrezGene=6508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11029 | |HGNC=11029 | ||
|TSSclassifier=strong | |||
|UniProt=F8WD49 | |UniProt=F8WD49 | ||
|association_with_transcript=0bp_to_ENST00000425141_5end | |association_with_transcript=0bp_to_ENST00000425141_5end | ||
|cluster_id=chr2:220492344..220492368,+ | |||
|coexpression_cluster_id=C751 | |||
|description=CAGE_peak_1_at_SLC4A3_5end | |description=CAGE_peak_1_at_SLC4A3_5end | ||
|id=chr2:220492344..220492368,+ | |id=chr2:220492344..220492368,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.61e-10!180;CL:0000220!6.63e-09!246;CL:0002321!7.58e-09!248;CL:0000221!4.57e-08!71 | |ontology_enrichment_celltype=CL:0000055!8.61e-10!180;CL:0000220!6.63e-09!246;CL:0002321!7.58e-09!248;CL:0000221!4.57e-08!71 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.52e-07,250;CL:0000221,1.82e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.69e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!7.81e-36!86;UBERON:0007284!7.81e-36!86;UBERON:0005743!2.27e-35!86;UBERON:0002346!2.68e-34!90;UBERON:0001017!1.67e-33!82;UBERON:0000073!5.11e-31!94;UBERON:0001016!5.11e-31!94;UBERON:0000475!1.11e-30!365;UBERON:0004121!1.13e-30!169;UBERON:0000955!2.89e-30!69;UBERON:0006238!2.89e-30!69;UBERON:0000924!4.99e-30!173;UBERON:0006601!4.99e-30!173;UBERON:0001049!1.37e-29!57;UBERON:0005068!1.37e-29!57;UBERON:0006241!1.37e-29!57;UBERON:0007135!1.37e-29!57;UBERON:0002616!3.53e-28!59;UBERON:0000483!1.54e-26!309;UBERON:0000033!2.58e-26!123;UBERON:0000119!2.73e-26!312;UBERON:0003056!3.12e-25!61;UBERON:0000153!1.77e-23!129;UBERON:0007811!1.77e-23!129;UBERON:0002780!4.28e-23!41;UBERON:0001890!4.28e-23!41;UBERON:0006240!4.28e-23!41;UBERON:0003080!8.89e-22!42;UBERON:0002020!5.00e-19!34;UBERON:0003528!5.00e-19!34;UBERON:0001893!6.30e-19!34;UBERON:0001869!8.08e-19!32;UBERON:0000481!1.83e-18!347;UBERON:0002791!2.88e-18!33;UBERON:0000025!2.52e-17!194;UBERON:0000468!5.44e-15!659;UBERON:0000064!8.61e-15!219;UBERON:0000956!1.06e-14!25;UBERON:0000203!1.06e-14!25;UBERON:0004111!3.57e-14!241;UBERON:0007023!8.52e-14!115;UBERON:0000467!2.38e-13!625;UBERON:0002619!2.71e-13!22;UBERON:0000480!3.08e-13!626;UBERON:0001950!4.81e-12!20;UBERON:0000922!8.34e-12!612;UBERON:0002050!1.40e-11!605;UBERON:0005423!1.40e-11!605;UBERON:0000923!2.02e-11!604;UBERON:0005291!2.02e-11!604;UBERON:0006598!2.02e-11!604;UBERON:0002532!2.02e-11!604;UBERON:0000477!2.74e-11!286;UBERON:0000062!3.10e-11!511;UBERON:0003076!6.42e-09!15;UBERON:0003057!6.42e-09!15;UBERON:0003103!1.31e-08!69;UBERON:0004733!7.03e-08!12;UBERON:0002028!7.03e-08!12;UBERON:0007277!7.03e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.54e-18;53!UBERON:0002616;1.54e-18;53!UBERON:0001869;1.62e-18;32!UBERON:0001893;4.34e-18;34!UBERON:0003528;4.66e-18;34!UBERON:0002020;4.66e-18;34!UBERON:0002780;6.48e-18;41!UBERON:0001890;6.48e-18;41!UBERON:0002791;1.36e-17;32!UBERON:0000956;5.29e-16;25!UBERON:0000203;5.29e-16;25!UBERON:0000955;8.55e-16;68!UBERON:0001017;8.62e-15;75!UBERON:0002619;1.68e-14;22!UBERON:0001950;3.77e-13;20!UBERON:0001016;1.03e-11;83!UBERON:0004733;2.14e-08;12!UBERON:0002028;2.14e-08;12!UBERON:0004732;3.11e-07;13!UBERON:0010371;6.22e-07;31 | |||
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| ||
|short_description=p1@SLC4A3 | |short_description=p1@SLC4A3 | ||
}} | }} |
Latest revision as of 22:25, 24 September 2015
Short description: | p1@SLC4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC4A3_5end |
Coexpression cluster: | C751_heart_pineal_left_cerebellum_pons_putamen_Mesothelial |
Association with transcript: | 0bp_to_ENST00000425141_5end |
EntrezGene: | SLC4A3 |
HGNC: | 11029 |
UniProt: | F8WD49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.52e-07 | 250 |
ectodermal cell | 1.82e-07 | 72 |