FFCP PHASE1:Hg19::chr18:56247409..56247424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_AK125243_5end | |association_with_transcript=-8bp_to_AK125243_5end | ||
|cluster_id=chr18:56247409..56247424,- | |||
|coexpression_cluster_id=C2468 | |||
|description=CAGE_peak_13_at_ALPK2_5end | |description=CAGE_peak_13_at_ALPK2_5end | ||
|id=chr18:56247409..56247424,- | |id=chr18:56247409..56247424,- | ||
|ontology_enrichment_celltype=CL:0002057!1.92e-13!42;CL:0000860!5.62e-12!45;CL:0002620!6.37e-10!23;CL:0000128!6.37e-09!7;CL:0000126!6.37e-09!7;CL:0000127!6.37e-09!7;CL:0002453!6.37e-09!7;CL:0000243!1.01e-08!15;CL:0000125!1.01e-08!15;CL:0000030!1.01e-08!15;CL:0000339!1.01e-08!15;CL:0000055!7.31e-08!180;CL:0000095!1.96e-07!17;CL:0000123!1.96e-07!17;CL:0000057!2.42e-07!75;CL:0002009!5.83e-07!65;CL:0002194!8.71e-07!63;CL:0000576!8.71e-07!63;CL:0000040!8.71e-07!63;CL:0000559!8.71e-07!63 | |ontology_enrichment_celltype=CL:0002057!1.92e-13!42;CL:0000860!5.62e-12!45;CL:0002620!6.37e-10!23;CL:0000128!6.37e-09!7;CL:0000126!6.37e-09!7;CL:0000127!6.37e-09!7;CL:0002453!6.37e-09!7;CL:0000243!1.01e-08!15;CL:0000125!1.01e-08!15;CL:0000030!1.01e-08!15;CL:0000339!1.01e-08!15;CL:0000055!7.31e-08!180;CL:0000095!1.96e-07!17;CL:0000123!1.96e-07!17;CL:0000057!2.42e-07!75;CL:0002009!5.83e-07!65;CL:0002194!8.71e-07!63;CL:0000576!8.71e-07!63;CL:0000040!8.71e-07!63;CL:0000559!8.71e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.56e-29;33!CL:0002057;2.56e-29;33!CL:0000473;1.66e-18;39!CL:0000234;1.66e-18;39!CL:0000576;1.14e-13;48!CL:0000128;6.78e-12;7!CL:0000126;6.78e-12;7!CL:0000127;6.78e-12;7!CL:0002605;1.85e-11;3!CL:0000243;2.44e-11;15!CL:0000125;2.44e-11;15!CL:0000095;5.36e-10;17!CL:0000197;1.70e-08;6!CL:0000098;1.70e-08;6!CL:0002167;1.70e-08;6!CL:0000453;3.57e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.01e-23,42;CL:0002057,2.01e-23,42;CL:0000473,7.06e-20,48;CL:0000234,7.06e-20,48;CL:0002194,6.21e-15,59;CL:0000576,6.21e-15,59;CL:0000040,6.21e-15,59;CL:0000559,6.21e-15,59;CL:0002009,2.68e-14,61;CL:0000839,7.03e-13,66;CL:0000557,1.27e-12,67;CL:0000128,7.29e-12,7;CL:0000126,7.29e-12,7;CL:0000127,7.29e-12,7;CL:0002453,7.29e-12,7;CL:0002605,1.80e-11,3;CL:0000766,1.94e-11,72;CL:0000243,2.13e-11,15;CL:0000125,2.13e-11,15;CL:0000030,2.13e-11,15;CL:0000339,2.13e-11,15;CL:0000095,4.76e-10,17;CL:0000123,4.76e-10,17;CL:0000763,3.55e-09,108;CL:0000049,3.55e-09,108;CL:0000197,1.79e-08,6;CL:0000098,1.79e-08,6;CL:0002167,1.79e-08,6;CL:0000453,3.58e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.00e-17;42!CL:0000339;2.44e-11;15 | |||
|ontology_enrichment_disease=DOID:17!5.75e-07!5;DOID:450!5.75e-07!5;DOID:66!5.75e-07!5;DOID:423!5.75e-07!5;DOID:0080000!5.75e-07!5;DOID:11722!5.75e-07!5 | |ontology_enrichment_disease=DOID:17!5.75e-07!5;DOID:450!5.75e-07!5;DOID:66!5.75e-07!5;DOID:423!5.75e-07!5;DOID:0080000!5.75e-07!5;DOID:11722!5.75e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.77e-10;5!DOID:450;1.77e-10;5!DOID:66;1.77e-10;5!DOID:423;1.77e-10;5!DOID:0080000;1.77e-10;5!DOID:11722;1.77e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.05e-10,5;DOID:450,2.05e-10,5;DOID:66,2.05e-10,5;DOID:423,2.05e-10,5;DOID:0080000,2.05e-10,5;DOID:11722,2.05e-10,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.04e-10,82;UBERON:0002371,1.31e-10,76;UBERON:0004765,2.36e-09,90;UBERON:0001434,5.71e-08,100;UBERON:0002405,6.86e-08,93;UBERON:0002390,2.82e-07,98;UBERON:0003061,2.82e-07,98 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23121058076788,0.204000691244253,1.25381888591235,6.86966369114536,5.33810257784248,5.64941878176613,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697287110717054,4.11167888021826,2.16794459626573,3.16461631554365,3.84241059793651,1.41889337933151,0.689491361473237,1.29096936716765,0,0.941211697713023,3.82068610080984,1.34834090667051,4.59125838556354,5.1348644332175,3.83602275479425,0.989553900560148,1.19678194572979,0.852449501065388,1.16083695451434,2.8369261234557,0.622822248995575,3.51748131359441,4.69334626578181,3.25783267057675,1.21079900526674,2.57794345191295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.43917392846563,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.98613771219828,0.286836620748814,0,0,0,0,0.622422070799533,0,0,0.302714855289863,0,0,0,0,0,0,0.323745888736263,0,0,0.122834317311768,0.206651562351531,1.18800285728205,1.23633464639278,0,0,0.168336113954066,0,0,0,0.30648779579902,0.45071417671979,0,1.25572744982203,3.41691822109708,2.11931901159562,0.900273288253207,1.23663035086127,0.772921620136887,0.930584281657949,0,0.194874010322397,1.00973509697646,3.77404584433427,0.80823028409406,0.710019185033229,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,2.3218396401599,0,0.118306800039844,0.337169380156203,0.723033089650446,0.441175890929576,0.871517776369625,0.474541238222193,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0.500170521059677,0,2.07970861530807,1.24900292158013,1.10391690523754,1.99140405487612,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,1.53461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.459257792658427,0,0.131124414959424,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0.644521469209642,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,1.2655176988749,1.33441135746677,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,6.5351313765475,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0.715880777515084,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.694499979733169,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,14.5588664524339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,1.13843818411917,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,1.9026588850306,2.510468311496,9.17983958726896,0.577901179803038,0,0,0,0,0,0,0,0,0,0.858452096273142,0.223171457441873,0,0,0,0,0,0.0674035438541849,0,0.169346664131569,0,0,0,0,0,0.2249738915515,0,0,0,0.630445658393585,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0.566560457600628,0,0,0,0,0.684347351537318,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,1.14241563650639,0,0.181848659202559,0,0,0,0.400027764663154,0,0.673498977531838,0,0.192619830407303,6.86213092399762,0,0.226705925512272,0,0.489473409012935,0,0.308801447160972,0,0,0,0,0.512483037175893,4.14516410077438,0.303859956177382,0,10.3275963684876,15.01372695541,8.5054005013039,2.6208787907713,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,3.6749457282384,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,1.51149313853035,5.7330202546446,0.142953088353313,0,0.929931402945002,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 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| ||
|short_description=p13@ALPK2 | |short_description=p13@ALPK2 | ||
}} | }} |
Latest revision as of 00:10, 20 September 2015
Short description: | p13@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ALPK2_5end |
Coexpression cluster: | C2468_clear_migratory_mesothelioma_Astrocyte_glioblastoma_alveolar_renal |
Association with transcript: | -8bp_to_AK125243_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.01e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-23 | 42 |
defensive cell | 7.06e-20 | 48 |
phagocyte | 7.06e-20 | 48 |
monopoietic cell | 6.21e-15 | 59 |
monocyte | 6.21e-15 | 59 |
monoblast | 6.21e-15 | 59 |
promonocyte | 6.21e-15 | 59 |
macrophage dendritic cell progenitor | 2.68e-14 | 61 |
myeloid lineage restricted progenitor cell | 7.03e-13 | 66 |
granulocyte monocyte progenitor cell | 1.27e-12 | 67 |
oligodendrocyte | 7.29e-12 | 7 |
macroglial cell | 7.29e-12 | 7 |
astrocyte | 7.29e-12 | 7 |
oligodendrocyte precursor cell | 7.29e-12 | 7 |
astrocyte of the cerebral cortex | 1.80e-11 | 3 |
myeloid leukocyte | 1.94e-11 | 72 |
glial cell (sensu Vertebrata) | 2.13e-11 | 15 |
glial cell | 2.13e-11 | 15 |
glioblast | 2.13e-11 | 15 |
glioblast (sensu Vertebrata) | 2.13e-11 | 15 |
neuron associated cell | 4.76e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 4.76e-10 | 17 |
myeloid cell | 3.55e-09 | 108 |
common myeloid progenitor | 3.55e-09 | 108 |
receptor cell | 1.79e-08 | 6 |
sensory epithelial cell | 1.79e-08 | 6 |
olfactory epithelial cell | 1.79e-08 | 6 |
Langerhans cell | 3.58e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.04e-10 | 82 |
bone marrow | 1.31e-10 | 76 |
skeletal element | 2.36e-09 | 90 |
skeletal system | 5.71e-08 | 100 |
immune system | 6.86e-08 | 93 |
hematopoietic system | 2.82e-07 | 98 |
blood island | 2.82e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.05e-10 | 5 |
myotonic disease | 2.05e-10 | 5 |
muscle tissue disease | 2.05e-10 | 5 |
myopathy | 2.05e-10 | 5 |
muscular disease | 2.05e-10 | 5 |
myotonic dystrophy | 2.05e-10 | 5 |