FFCP PHASE1:Hg19::chr18:56203944..56203982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=368bp_to_AK092194,AX747403_5end | |association_with_transcript=368bp_to_AK092194,AX747403_5end | ||
|cluster_id=chr18:56203944..56203982,- | |||
|coexpression_cluster_id=C821 | |||
|description=CAGE_peak_17_at_ALPK2_5end | |description=CAGE_peak_17_at_ALPK2_5end | ||
|id=chr18:56203944..56203982,- | |id=chr18:56203944..56203982,- | ||
|ontology_enrichment_celltype=CL:0002057!3.57e-73!42;CL:0000860!2.06e-67!45;CL:0002009!8.43e-47!65;CL:0000557!4.36e-44!71;CL:0002194!1.58e-43!63;CL:0000576!1.58e-43!63;CL:0000040!1.58e-43!63;CL:0000559!1.58e-43!63;CL:0000738!1.85e-42!140;CL:0000766!2.82e-40!76;CL:0000839!5.64e-38!70;CL:0002087!9.12e-36!119;CL:0000037!6.17e-34!172;CL:0000566!6.17e-34!172;CL:0000763!1.22e-32!112;CL:0000049!1.22e-32!112;CL:0002031!2.08e-32!124;CL:0000988!4.43e-31!182;CL:0002032!2.13e-29!165;CL:0000837!2.13e-29!165;CL:0000134!4.91e-17!358;CL:0002393!5.84e-17!9;CL:0002397!5.84e-17!9;CL:0002320!2.55e-16!365;CL:0000219!4.09e-15!390;CL:0000034!1.48e-13!444;CL:0000048!2.98e-13!430;CL:0000723!8.76e-13!436;CL:0000453!2.08e-11!5;CL:0000767!6.48e-07!3;CL:0000451!9.08e-07!10 | |ontology_enrichment_celltype=CL:0002057!3.57e-73!42;CL:0000860!2.06e-67!45;CL:0002009!8.43e-47!65;CL:0000557!4.36e-44!71;CL:0002194!1.58e-43!63;CL:0000576!1.58e-43!63;CL:0000040!1.58e-43!63;CL:0000559!1.58e-43!63;CL:0000738!1.85e-42!140;CL:0000766!2.82e-40!76;CL:0000839!5.64e-38!70;CL:0002087!9.12e-36!119;CL:0000037!6.17e-34!172;CL:0000566!6.17e-34!172;CL:0000763!1.22e-32!112;CL:0000049!1.22e-32!112;CL:0002031!2.08e-32!124;CL:0000988!4.43e-31!182;CL:0002032!2.13e-29!165;CL:0000837!2.13e-29!165;CL:0000134!4.91e-17!358;CL:0002393!5.84e-17!9;CL:0002397!5.84e-17!9;CL:0002320!2.55e-16!365;CL:0000219!4.09e-15!390;CL:0000034!1.48e-13!444;CL:0000048!2.98e-13!430;CL:0000723!8.76e-13!436;CL:0000453!2.08e-11!5;CL:0000767!6.48e-07!3;CL:0000451!9.08e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-67;33!CL:0002057;2.17e-67;33!CL:0000473;1.41e-45;39!CL:0000234;1.41e-45;39!CL:0000576;1.04e-41;48!CL:0000766;1.00e-28;69!CL:0002087;2.59e-15;104!CL:0000453;3.01e-14;5!CL:0000738;5.31e-12;136!CL:0000763;7.47e-12;100!CL:0002393;1.46e-10;6!CL:0002397;1.46e-10;6!CL:0000451;1.64e-09;10!CL:0000990;6.27e-08;8!CL:0000945;1.49e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.43e-82,42;CL:0002057,1.43e-82,42;CL:0000473,2.40e-71,48;CL:0000234,2.40e-71,48;CL:0002009,1.40e-57,61;CL:0002194,1.25e-55,59;CL:0000576,1.25e-55,59;CL:0000040,1.25e-55,59;CL:0000559,1.25e-55,59;CL:0000557,2.31e-55,67;CL:0000766,5.88e-51,72;CL:0000738,4.45e-50,136;CL:0000839,4.63e-49,66;CL:0000763,3.33e-44,108;CL:0000049,3.33e-44,108;CL:0002031,1.86e-41,120;CL:0002087,5.37e-41,115;CL:0000037,6.36e-41,168;CL:0002032,6.54e-41,161;CL:0000837,6.54e-41,161;CL:0000988,2.16e-38,177;CL:0000134,1.28e-14,354;CL:0000453,3.68e-14,5;CL:0002320,3.74e-14,361;CL:0000219,1.62e-12,386;CL:0000034,2.12e-12,441;CL:0000048,2.41e-11,427;CL:0000723,4.69e-11,433;CL:0002393,1.59e-10,9;CL:0002397,1.59e-10,9;CL:0000451,1.73e-09,10;CL:0000990,6.99e-08,8;CL:0000945,1.66e-07,24;CL:0000826,1.66e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.13e-57;42!CL:0000049;2.32e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.86e-41!102;UBERON:0003061!1.86e-41!102;UBERON:0002371!1.27e-39!80;UBERON:0002193!5.07e-38!112;UBERON:0001474!6.12e-36!86;UBERON:0002405!6.99e-32!115;UBERON:0004765!1.17e-28!101;UBERON:0001434!1.17e-28!101;UBERON:0003081!1.52e-16!216;UBERON:0002384!2.41e-15!375;UBERON:0002204!6.38e-15!167 | |ontology_enrichment_uberon=UBERON:0002390!1.86e-41!102;UBERON:0003061!1.86e-41!102;UBERON:0002371!1.27e-39!80;UBERON:0002193!5.07e-38!112;UBERON:0001474!6.12e-36!86;UBERON:0002405!6.99e-32!115;UBERON:0004765!1.17e-28!101;UBERON:0001434!1.17e-28!101;UBERON:0003081!1.52e-16!216;UBERON:0002384!2.41e-15!375;UBERON:0002204!6.38e-15!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.27e-48,76;UBERON:0001474,5.50e-44,82;UBERON:0002405,8.83e-41,93;UBERON:0004765,1.88e-39,90;UBERON:0002390,2.50e-38,98;UBERON:0003061,2.50e-38,98;UBERON:0001434,8.56e-35,100;UBERON:0002193,4.24e-34,108;UBERON:0002204,2.43e-19,167;UBERON:0003081,7.93e-16,203;UBERON:0002384,1.61e-13,371;UBERON:0000926,1.62e-07,315;UBERON:0004120,1.62e-07,315;UBERON:0006603,1.62e-07,315 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,3.82067028739756,2.62721886239826,2.12519109546934,1.96682138424452,0.767658796194425,1.39334510984468,0,0,0,0,0.142169232487422,0.293600439334847,1.10799081706375,1.60435557976113,0.868043482863407,0,0,0,0.726991193897824,1.88937971844405,0,0.464858073811369,2.46700732813095,1.54853185447552,6.04154023876516,8.45330331546032,10.1687358852092,2.75796544589295,1.93645405075148,1.35426486594342,2.07066573496865,5.45812300115692,4.49446968890169,5.50951006267625,8.66508373105453,4.47535988059329,4.94776950280074,4.58766412529753,5.96714650745772,0.870627715885752,2.26954089876456,1.86846674698672,7.03496262718881,4.17186334736161,8.90474263290978,0.605399502633369,3.68277635987565,2.53169909952708,1.26753171787165,0.425208599930087,1.67726916406701,0.786300418025466,0,0.16072558669708,1.71007646244749,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0.382273228125229,2.64342657158052,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0.669514372325618,0,0,0,0,0,0,0,2.03215996957883,0,0,0,0,0,4.04953004792701,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,4.09206648562716,4.38453973034098,7.85113892428052,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91795557689649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,5.99646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.201273793591026,5.12909587685173 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| ||
|short_description=p17@ALPK2 | |short_description=p17@ALPK2 | ||
}} | }} |
Latest revision as of 23:55, 19 September 2015
Short description: | p17@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_ALPK2_5end |
Coexpression cluster: | C821_migratory_CD14_immature_CD14CD16_Dendritic_Macrophage_Monocytederived |
Association with transcript: | 368bp_to_AK092194, AX747403_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.27e-48 | 76 |
bone element | 5.50e-44 | 82 |
immune system | 8.83e-41 | 93 |
skeletal element | 1.88e-39 | 90 |
hematopoietic system | 2.50e-38 | 98 |
blood island | 2.50e-38 | 98 |
skeletal system | 8.56e-35 | 100 |
hemolymphoid system | 4.24e-34 | 108 |
musculoskeletal system | 2.43e-19 | 167 |
lateral plate mesoderm | 7.93e-16 | 203 |
connective tissue | 1.61e-13 | 371 |
mesoderm | 1.62e-07 | 315 |
mesoderm-derived structure | 1.62e-07 | 315 |
presumptive mesoderm | 1.62e-07 | 315 |