FFCP PHASE1:Hg19::chr2:220119435..220119442,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7277 | |EntrezGene=7277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12407 | |HGNC=12407 | ||
|TSSclassifier=strong | |||
|UniProt=A8MUB1 | |UniProt=A8MUB1 | ||
|association_with_transcript=-105bp_to_ENST00000392088,uc010zkz.1_5end | |association_with_transcript=-105bp_to_ENST00000392088,uc010zkz.1_5end | ||
|cluster_id=chr2:220119435..220119442,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_27_at_TUBA4A_5end | |description=CAGE_peak_27_at_TUBA4A_5end | ||
|id=chr2:220119435..220119442,- | |id=chr2:220119435..220119442,- | ||
|ontology_enrichment_celltype=CL:0000738!7.97e-18!140;CL:0000988!4.70e-15!182;CL:0000037!3.51e-14!172;CL:0000566!3.51e-14!172;CL:0002087!2.51e-13!119;CL:0000766!4.43e-13!76;CL:0000623!4.40e-12!3;CL:0000825!4.40e-12!3;CL:0000767!4.56e-12!3;CL:0002032!8.27e-12!165;CL:0000837!8.27e-12!165;CL:0002031!2.31e-11!124;CL:0000080!4.44e-09!6;CL:0002194!1.56e-08!63;CL:0000576!1.56e-08!63;CL:0000040!1.56e-08!63;CL:0000559!1.56e-08!63;CL:0000839!1.58e-08!70;CL:0000763!2.09e-08!112;CL:0000049!2.09e-08!112;CL:0000557!2.33e-08!71;CL:0002009!3.55e-08!65;CL:0000094!9.09e-08!8;CL:0002057!1.39e-07!42;CL:0000791!5.31e-07!18;CL:0000789!5.31e-07!18;CL:0002420!5.31e-07!18;CL:0002419!5.31e-07!18;CL:0000790!5.31e-07!18;CL:0000860!6.16e-07!45 | |ontology_enrichment_celltype=CL:0000738!7.97e-18!140;CL:0000988!4.70e-15!182;CL:0000037!3.51e-14!172;CL:0000566!3.51e-14!172;CL:0002087!2.51e-13!119;CL:0000766!4.43e-13!76;CL:0000623!4.40e-12!3;CL:0000825!4.40e-12!3;CL:0000767!4.56e-12!3;CL:0002032!8.27e-12!165;CL:0000837!8.27e-12!165;CL:0002031!2.31e-11!124;CL:0000080!4.44e-09!6;CL:0002194!1.56e-08!63;CL:0000576!1.56e-08!63;CL:0000040!1.56e-08!63;CL:0000559!1.56e-08!63;CL:0000839!1.58e-08!70;CL:0000763!2.09e-08!112;CL:0000049!2.09e-08!112;CL:0000557!2.33e-08!71;CL:0002009!3.55e-08!65;CL:0000094!9.09e-08!8;CL:0002057!1.39e-07!42;CL:0000791!5.31e-07!18;CL:0000789!5.31e-07!18;CL:0002420!5.31e-07!18;CL:0002419!5.31e-07!18;CL:0000790!5.31e-07!18;CL:0000860!6.16e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.29e-23;3!CL:0000791;4.94e-23;18!CL:0000789;4.94e-23;18!CL:0002419;4.94e-23;18!CL:0000767;6.43e-23;3!CL:0000094;3.61e-19;8!CL:0000084;1.26e-16;25!CL:0000625;3.01e-14;11!CL:0000081;3.95e-14;11!CL:0000624;5.67e-12;6!CL:0000771;1.38e-09;2!CL:0000542;2.08e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.03e-23,18;CL:0000789,4.03e-23,18;CL:0002420,4.03e-23,18;CL:0002419,4.03e-23,18;CL:0000790,4.03e-23,18;CL:0000767,5.15e-23,3;CL:0000623,5.76e-23,3;CL:0000825,5.76e-23,3;CL:0000094,2.91e-19,8;CL:0000084,1.09e-16,25;CL:0000827,1.09e-16,25;CL:0000838,2.93e-15,52;CL:0000542,5.78e-15,53;CL:0000051,5.78e-15,53;CL:0000625,2.57e-14,11;CL:0000081,3.37e-14,11;CL:0000738,8.70e-14,136;CL:0000624,5.37e-12,6;CL:0002032,1.60e-11,161;CL:0000837,1.60e-11,161;CL:0000037,5.26e-11,168;CL:0000988,2.11e-10,177;CL:0000771,1.22e-09,2;CL:0002087,1.40e-08,115;CL:0002031,3.37e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;4.94e-23;18!CL:0000051;2.08e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.83e-11!102;UBERON:0003061!1.83e-11!102;UBERON:0002193!5.64e-10!112;UBERON:0002133!3.93e-08!2;UBERON:0002371!4.77e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p27@TUBA4A | |short_description=p27@TUBA4A | ||
}} | }} |
Latest revision as of 20:05, 24 September 2015
Short description: | p27@TUBA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_TUBA4A_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -105bp_to_ENST00000392088, uc010zkz.1_5end |
EntrezGene: | TUBA4A |
HGNC: | 12407 |
UniProt: | A8MUB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.03e-23 | 18 |
alpha-beta T cell | 4.03e-23 | 18 |
immature T cell | 4.03e-23 | 18 |
mature T cell | 4.03e-23 | 18 |
immature alpha-beta T cell | 4.03e-23 | 18 |
basophil | 5.15e-23 | 3 |
natural killer cell | 5.76e-23 | 3 |
pro-NK cell | 5.76e-23 | 3 |
granulocyte | 2.91e-19 | 8 |
T cell | 1.09e-16 | 25 |
pro-T cell | 1.09e-16 | 25 |
lymphoid lineage restricted progenitor cell | 2.93e-15 | 52 |
lymphocyte | 5.78e-15 | 53 |
common lymphoid progenitor | 5.78e-15 | 53 |
CD8-positive, alpha-beta T cell | 2.57e-14 | 11 |
blood cell | 3.37e-14 | 11 |
leukocyte | 8.70e-14 | 136 |
CD4-positive, alpha-beta T cell | 5.37e-12 | 6 |
hematopoietic oligopotent progenitor cell | 1.60e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-11 | 161 |
hematopoietic stem cell | 5.26e-11 | 168 |
hematopoietic cell | 2.11e-10 | 177 |
eosinophil | 1.22e-09 | 2 |
nongranular leukocyte | 1.40e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.37e-08 | 120 |