FFCP PHASE1:Hg19::chr12:109915098..109915131,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:109915098..109915131,-
|short_description=p1@KCTD10
|description=CAGE_peak_1_at_KCTD10_5end
|association_with_transcript=0bp_to_ENST00000535747,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83892 | |EntrezGene=83892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23236 | |HGNC=23236 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6V0,F5H497 | |UniProt=F5H6V0,F5H497 | ||
|association_with_transcript=0bp_to_ENST00000535747,ENST00000537165,ENST00000538377,ENST00000542262,ENST00000542858_5end | |||
|cluster_id=chr12:109915098..109915131,- | |||
|coexpression_cluster_id=C3236 | |||
|description=CAGE_peak_1_at_KCTD10_5end | |||
|id=chr12:109915098..109915131,- | |||
|ontology_enrichment_celltype=CL:0000055!3.29e-35!180;CL:0000222!3.23e-25!119;CL:0000057!4.29e-21!75;CL:0002371!1.86e-19!591;CL:0000220!4.36e-19!246;CL:0002321!9.02e-19!248;CL:0000144!1.07e-18!625;CL:0000183!2.96e-17!59;CL:0000680!8.24e-17!57;CL:0000056!8.24e-17!57;CL:0000355!8.24e-17!57;CL:0000187!5.45e-16!54;CL:0000192!6.19e-16!42;CL:0000514!6.19e-16!42;CL:0000393!1.99e-13!60;CL:0000211!1.99e-13!60;CL:0000359!3.97e-13!32;CL:0000548!3.77e-11!679;CL:0000004!3.77e-11!679;CL:0000255!3.77e-11!679;CL:0000012!1.87e-10!682;CL:0002620!7.81e-10!23;CL:0000213!9.65e-09!57;CL:0000215!9.65e-09!57;CL:0002078!5.82e-08!44;CL:0000723!6.20e-08!436;CL:0000115!6.46e-08!35;CL:0000048!1.00e-07!430;CL:0000136!1.94e-07!15;CL:0000034!4.24e-07!444;CL:0002139!4.32e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.54e-12;32!CL:0000192;3.17e-11;43!CL:0000057;8.15e-10;73!CL:0002620;8.26e-10;23!CL:0000187;7.00e-09;55!CL:0002139;4.41e-07;24!CL:0000393;4.95e-07;61!CL:0000211;4.95e-07;61!CL:0000115;5.17e-07;36!CL:0002320;6.53e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.90e-25,121;CL:0000057,1.20e-21,76;CL:0002321,6.22e-19,250;CL:0000680,1.96e-16,58;CL:0000056,1.96e-16,58;CL:0000355,1.96e-16,58;CL:0000187,1.30e-15,55;CL:0000192,1.80e-15,43;CL:0000514,1.80e-15,43;CL:0000393,3.93e-13,61;CL:0000211,3.93e-13,61;CL:0000359,3.97e-13,32;CL:0002620,7.81e-10,23;CL:0000213,5.15e-09,58;CL:0000215,5.15e-09,58;CL:0000723,2.51e-08,433;CL:0002078,3.06e-08,45;CL:0000115,3.32e-08,36;CL:0000048,4.11e-08,427;CL:0000034,1.82e-07,441;CL:0000136,1.94e-07,15;CL:0002139,4.32e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;3.17e-11;43!CL:0000355;7.45e-09;58!CL:0000222;2.75e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.50e-23!79;UBERON:0007798!1.50e-23!79;UBERON:0004872!2.76e-21!84;UBERON:0000055!5.42e-21!69;UBERON:0001981!3.22e-20!60;UBERON:0007500!3.22e-20!60;UBERON:0004537!3.22e-20!60;UBERON:0006965!3.22e-20!60;UBERON:0000914!4.45e-20!83;UBERON:0002329!4.45e-20!83;UBERON:0003077!4.45e-20!83;UBERON:0003059!4.45e-20!83;UBERON:0007282!4.45e-20!83;UBERON:0009618!4.45e-20!83;UBERON:0007285!4.45e-20!83;UBERON:0004535!1.19e-17!110;UBERON:0001009!1.49e-17!113;UBERON:0004290!2.17e-17!70;UBERON:0000486!6.20e-17!82;UBERON:0005256!2.18e-16!143;UBERON:0001637!3.82e-16!42;UBERON:0003509!3.82e-16!42;UBERON:0004572!3.82e-16!42;UBERON:0003914!5.24e-16!118;UBERON:0002385!1.03e-14!63;UBERON:0001015!1.03e-14!63;UBERON:0000383!1.03e-14!63;UBERON:0001134!1.42e-14!61;UBERON:0002036!1.42e-14!61;UBERON:0003082!1.42e-14!61;UBERON:0000490!4.63e-13!138;UBERON:0000468!6.65e-13!659;UBERON:0004573!8.85e-13!33;UBERON:0004571!8.85e-13!33;UBERON:0003102!2.31e-12!95;UBERON:0000475!2.72e-12!365;UBERON:0000467!3.32e-12!625;UBERON:0000480!6.12e-12!626;UBERON:0002100!1.07e-11!216;UBERON:0000119!1.52e-11!312;UBERON:0000483!2.37e-11!309;UBERON:0002199!2.36e-10!45;UBERON:0002416!2.36e-10!45;UBERON:0002097!3.97e-09!40;UBERON:0000926!2.37e-08!448;UBERON:0004120!2.37e-08!448;UBERON:0006603!2.37e-08!448;UBERON:0000477!4.48e-08!286;UBERON:0004111!4.76e-08!241;UBERON:0000947!1.04e-07!21;UBERON:0010191!1.04e-07!21;UBERON:0000487!8.72e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.98e-12;42!UBERON:0003509;8.98e-12;42!UBERON:0004572;8.98e-12;42!UBERON:0007500;1.55e-11;56!UBERON:0001981;1.55e-11;56!UBERON:0004537;1.55e-11;56!UBERON:0004573;1.63e-11;33!UBERON:0004571;1.63e-11;33!UBERON:0000055;2.47e-10;65!UBERON:0002049;5.71e-10;75!UBERON:0007798;5.71e-10;75!UBERON:0003914;2.35e-09;74!UBERON:0000947;1.05e-07;21!UBERON:0010191;1.05e-07;21!UBERON:0002097;1.42e-07;41!UBERON:0002199;4.30e-07;46!UBERON:0002416;4.30e-07;46!UBERON:0002384;4.85e-07;198!UBERON:0003102;5.34e-07;50!UBERON:0000487;8.62e-07;22 | |||
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| ||
|short_description=p1@KCTD10 | |||
}} | }} |
Latest revision as of 06:40, 16 September 2015
Short description: | p1@KCTD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCTD10_5end |
Coexpression cluster: | C3236_Mesenchymal_Endothelial_Smooth_Hair_Fibroblast_Preadipocyte_Renal |
Association with transcript: | 0bp_to_ENST00000535747, ENST00000537165, ENST00000538377, ENST00000542262, ENST00000542858_5end |
EntrezGene: | KCTD10 |
HGNC: | 23236 |
UniProt: | F5H6V0F5H497 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.90e-25 | 121 |
fibroblast | 1.20e-21 | 76 |
embryonic cell | 6.22e-19 | 250 |
muscle precursor cell | 1.96e-16 | 58 |
myoblast | 1.96e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.96e-16 | 58 |
muscle cell | 1.30e-15 | 55 |
smooth muscle cell | 1.80e-15 | 43 |
smooth muscle myoblast | 1.80e-15 | 43 |
electrically responsive cell | 3.93e-13 | 61 |
electrically active cell | 3.93e-13 | 61 |
vascular associated smooth muscle cell | 3.97e-13 | 32 |
skin fibroblast | 7.81e-10 | 23 |
lining cell | 5.15e-09 | 58 |
barrier cell | 5.15e-09 | 58 |
somatic stem cell | 2.51e-08 | 433 |
meso-epithelial cell | 3.06e-08 | 45 |
endothelial cell | 3.32e-08 | 36 |
multi fate stem cell | 4.11e-08 | 427 |
stem cell | 1.82e-07 | 441 |
fat cell | 1.94e-07 | 15 |
endothelial cell of vascular tree | 4.32e-07 | 24 |