FFCP PHASE1:Hg19::chr18:53254728..53254740,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=P15884 | |UniProt=P15884 | ||
|association_with_transcript=-360bp_to_BC125084,BC125085_5end | |association_with_transcript=-360bp_to_BC125084,BC125085_5end | ||
|cluster_id=chr18:53254728..53254740,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_79_at_TCF4_5end | |description=CAGE_peak_79_at_TCF4_5end | ||
|id=chr18:53254728..53254740,- | |id=chr18:53254728..53254740,- | ||
|ontology_enrichment_celltype=CL:0000784!4.34e-11!3;CL:0000242!2.92e-07!2 | |ontology_enrichment_celltype=CL:0000784!4.34e-11!3;CL:0000242!2.92e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.52e-87;3!CL:0000451;6.20e-25;10!CL:0000840;2.59e-12;5!CL:0000990;1.16e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.52e-87,3;CL:0000451,6.20e-25,10;CL:0000840,2.45e-12,5;CL:0001029,2.45e-12,5;CL:0000990,1.12e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.91e-10!82;UBERON:0000073!1.91e-10!94;UBERON:0001016!1.91e-10!94;UBERON:0005743!9.58e-10!86;UBERON:0000924!2.60e-09!173;UBERON:0006601!2.60e-09!173;UBERON:0004121!7.22e-09!169;UBERON:0000955!7.47e-07!69;UBERON:0006238!7.47e-07!69 | |ontology_enrichment_uberon=UBERON:0001017!1.91e-10!82;UBERON:0000073!1.91e-10!94;UBERON:0001016!1.91e-10!94;UBERON:0005743!9.58e-10!86;UBERON:0000924!2.60e-09!173;UBERON:0006601!2.60e-09!173;UBERON:0004121!7.22e-09!169;UBERON:0000955!7.47e-07!69;UBERON:0006238!7.47e-07!69 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p79@TCF4 | |short_description=p79@TCF4 | ||
}} | }} |
Latest revision as of 21:21, 19 September 2015
Short description: | p79@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_79_at_TCF4_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | -360bp_to_BC125084, BC125085_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | P15884 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.52e-87 | 3 |
dendritic cell | 6.20e-25 | 10 |
immature conventional dendritic cell | 2.45e-12 | 5 |
common dendritic progenitor | 2.45e-12 | 5 |
conventional dendritic cell | 1.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |