FFCP PHASE1:Hg19::chr18:3603992..3604003,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:3603992..3604003,- | |||
|coexpression_cluster_id=C998 | |||
|description=CAGE_peak_at_chr18:3603992..3604003,- | |description=CAGE_peak_at_chr18:3603992..3604003,- | ||
|id=chr18:3603992..3604003,- | |id=chr18:3603992..3604003,- | ||
|ontology_enrichment_celltype=CL:0000055!3.21e-08!180;CL:0000048!2.74e-07!430;CL:0000548!4.13e-07!679;CL:0000004!4.13e-07!679;CL:0000255!4.13e-07!679;CL:0000723!7.97e-07!436;CL:0000012!8.87e-07!682 | |ontology_enrichment_celltype=CL:0000055!3.21e-08!180;CL:0000048!2.74e-07!430;CL:0000548!4.13e-07!679;CL:0000004!4.13e-07!679;CL:0000255!4.13e-07!679;CL:0000723!7.97e-07!436;CL:0000012!8.87e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000134;9.80e-11;55!CL:0000048;1.05e-09;58!CL:0000723;1.23e-09;61!CL:0000569;1.46e-09;4!CL:0000034;1.43e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,1.15e-09,4;CL:0000011,1.15e-09,4;CL:0002320,4.81e-09,361;CL:0000048,5.99e-08,427;CL:0000723,1.33e-07,433;CL:0000134,1.82e-07,354;CL:0000034,3.69e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000011;1.46e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!2.74e-10!14;DOID:120!6.72e-09!27;DOID:193!2.36e-08!29 | |ontology_enrichment_disease=DOID:2394!2.74e-10!14;DOID:120!6.72e-09!27;DOID:193!2.36e-08!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.76e-20;14!DOID:120;1.54e-10;27!DOID:193;1.38e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.25e-20,14;DOID:120,1.32e-10,27;DOID:193,1.21e-09,29 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;4.00e-11;5!UBERON:0001737;1.94e-09;9!UBERON:0001557;1.94e-09;9!UBERON:0000992;2.32e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,2.74e-11,5;UBERON:0000992,1.81e-09,13;UBERON:0001737,3.05e-09,9;UBERON:0002384,2.27e-08,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,1.74467704820074,0,0,0.261185628199839,0.245733936501509,0,0,0,2.84662611808107,3.97676850873499,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.697287110717054,0.411167888021826,0.309706370895104,0.575384784644301,1.0246428261164,0.945928919554341,2.75796544589295,0,1.35426486594342,0.376484679085209,0,0.224723484445085,4.89734227793444,3.53021929783703,2.55734850319616,0,0,0,3.77272010217159,3.97169657283798,1.24564449799115,0.502497330513487,0,0,0,2.57794345191295,1.58231193720442,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.2786256184353,1.44575660953827,0.50133791063589,0.579386075843295,1.5905718941022,1.94653948121054,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0.496971951695318,0.506522046658319,32.043021756799,16.0628507619336,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0.468642863667593,1.5608003841516,0,3.28787097213962,0,0,0,0,0,1.03325781175765,0,1.23633464639278,0,0,0,0,0.277064115484183,0.438977620880838,0.612975591598039,2.55404700141215,0.794025282120147,11.3015470483983,0.640672166455702,0.423863802319124,4.20127534518163,0.206105058476878,9.79034052173391,0.18611685633159,6.24472429292685,0.0974370051611986,12.1168211637175,0.184099797284599,0.323292113637624,9.23024940543197,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,1.38134921352481,20.4321888334071,12.9938306700525,1.77460200059766,2.19160097101532,1.44606617930089,1.21323370005633,1.08939722046203,2.13543557199987,0.674156540800822,1.37355025587742,0.38474715694639,0,0,0.8231480226628,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43293636324557,0.290633938513962,0,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,2.7165818795048,0,0,0.325736184293735,2.84313558994037,1.58390374586686,0,0,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,1.50051156317903,1.35632511849868,0.207970861530807,0.713715955188647,0.630809660135739,0.468565659970853,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,4.45039722535381,0,0.256278298511402,0,0.321707842287215,1.48418066444991,0.771048469013278,1.42049380250502,2.38168752440047,0.519254429183621,2.44041794765914,0,0.200506470303285,0,0.459257792658427,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.580024309752732,0,0.15350367472613,0.137836572484531,0,0,0,0.534192213880424,0,0,0,0.30347334256665,0.464845549297286,26.4442371337738,0.6970372701606,0.308033580176089,0,0,0.37064843820784,2.71937284809783,0,0.316379424718726,0,0.767693373934002,0.855877976067841,0.95460974377781,0,0.179872457583315,0,0.235624804691373,0.606547444719948,1.58510321173008,0.421258456238981,0,0,2.11300293513511,0,0.141405431953713,0,0.551365343546124,0,0.876901770507525,0,11.1502107847928,0.405820753925408,0.30982349809975,0,1.43411352204052,0.687743287091848,0,2.48332744849418,0.633322905892992,0.987884678879706,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,1.44701316529778,0,0,0.796991953004279,0,0,0.306806047506464,0,0,0.179736702294654,0.537063524026827,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,2.39664619741778,0.41827123283581,0.153900517007594,1.36730467016401,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0.210998064528027,0,0.424059214301822,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0.586993856796269,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0.569219092059585,0.138674673013139,0.694238953340524,0.293977192243133,0.261177619741208,0,0,2.22539561964896,2.48503678093031,1.31384731285135,0,0,0.225980740780532,0,0,0.0633107959558787,0.586654148204409,0.160317640503067,0,0,0.144090417154106,0,0,0.288109595976299,0,1.41416420770077,0,0.209205692624666,0.203996435272644,0.577901179803038,0,0,0,0,0,5.02708322290058,0.687481272035051,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,1.18112977817699,0,0,0.136203406111576,0.321506296930038,0.550157746388935,0.415440338029185,0,0.77380195455795,0.182248669974074,0,0,0,0.105600336519406,0,0,0,0,1.5256112259285,0,0,0,0,0.82092520749339,0,0,0.439656701034247,0,0.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| ||
|short_description=p@chr18:3603992..3604003,- | |short_description=p@chr18:3603992..3604003,- | ||
}} | }} |
Latest revision as of 00:47, 26 July 2015
Short description: | p@chr18:3603992..3604003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:3603992..3604003, - |
Coexpression cluster: | C998_Fibroblast_Smooth_mesenchymal_Hair_normal_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 1.15e-09 | 4 |
migratory trunk neural crest cell | 1.15e-09 | 4 |
connective tissue cell | 4.81e-09 | 361 |
multi fate stem cell | 5.99e-08 | 427 |
somatic stem cell | 1.33e-07 | 433 |
mesenchymal cell | 1.82e-07 | 354 |
stem cell | 3.69e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
right ovary | 2.74e-11 | 5 |
female gonad | 1.81e-09 | 13 |
larynx | 3.05e-09 | 9 |
connective tissue | 2.27e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.25e-20 | 14 |
female reproductive organ cancer | 1.32e-10 | 27 |
reproductive organ cancer | 1.21e-09 | 29 |