FFCP PHASE1:Hg19::chr2:208394627..208394655,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1385 | |EntrezGene=1385 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2345 | |HGNC=2345 | ||
|TSSclassifier=strong | |||
|UniProt=E7EWP8 | |UniProt=E7EWP8 | ||
|association_with_transcript=0bp_to_ENST00000353267,ENST00000445803_5end | |association_with_transcript=0bp_to_ENST00000353267,ENST00000445803_5end | ||
|cluster_id=chr2:208394627..208394655,+ | |||
|description=CAGE_peak_2_at_CREB1_5end | |description=CAGE_peak_2_at_CREB1_5end | ||
|id=chr2:208394627..208394655,+ | |id=chr2:208394627..208394655,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.45e-22!140;CL:0000037!6.33e-22!172;CL:0000566!6.33e-22!172;CL:0002032!6.96e-20!165;CL:0000837!6.96e-20!165;CL:0000988!1.36e-19!182;CL:0002031!4.95e-18!124;CL:0002087!2.87e-15!119;CL:0000763!2.69e-12!112;CL:0000049!2.69e-12!112;CL:0000766!1.93e-11!76;CL:0000557!1.30e-10!71;CL:0000839!2.64e-10!70;CL:0002057!2.61e-08!42;CL:0002009!4.68e-08!65;CL:0000838!6.99e-08!52;CL:0000542!9.99e-08!53;CL:0000051!9.99e-08!53;CL:0002194!1.13e-07!63;CL:0000576!1.13e-07!63;CL:0000040!1.13e-07!63;CL:0000559!1.13e-07!63 | |ontology_enrichment_celltype=CL:0000738!3.45e-22!140;CL:0000037!6.33e-22!172;CL:0000566!6.33e-22!172;CL:0002032!6.96e-20!165;CL:0000837!6.96e-20!165;CL:0000988!1.36e-19!182;CL:0002031!4.95e-18!124;CL:0002087!2.87e-15!119;CL:0000763!2.69e-12!112;CL:0000049!2.69e-12!112;CL:0000766!1.93e-11!76;CL:0000557!1.30e-10!71;CL:0000839!2.64e-10!70;CL:0002057!2.61e-08!42;CL:0002009!4.68e-08!65;CL:0000838!6.99e-08!52;CL:0000542!9.99e-08!53;CL:0000051!9.99e-08!53;CL:0002194!1.13e-07!63;CL:0000576!1.13e-07!63;CL:0000040!1.13e-07!63;CL:0000559!1.13e-07!63 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.51e-24,136;CL:0000037,1.16e-23,168;CL:0002032,1.48e-21,161;CL:0000837,1.48e-21,161;CL:0000988,2.27e-21,177;CL:0002031,6.56e-20,120;CL:0002087,5.41e-17,115;CL:0000763,7.60e-14,108;CL:0000049,7.60e-14,108;CL:0000766,2.43e-13,72;CL:0000557,1.69e-12,67;CL:0000839,3.60e-12,66;CL:0002009,1.06e-09,61;CL:0002194,2.70e-09,59;CL:0000576,2.70e-09,59;CL:0000040,2.70e-09,59;CL:0000559,2.70e-09,59;CL:0000860,2.61e-08,42;CL:0002057,2.61e-08,42;CL:0000838,6.99e-08,52;CL:0000473,8.45e-08,48;CL:0000234,8.45e-08,48;CL:0000542,9.99e-08,53;CL:0000051,9.99e-08,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.78e-24!115;UBERON:0002390!2.86e-14!102;UBERON:0003061!2.86e-14!102;UBERON:0001049!1.59e-12!57;UBERON:0005068!1.59e-12!57;UBERON:0006241!1.59e-12!57;UBERON:0007135!1.59e-12!57;UBERON:0002193!1.44e-11!112;UBERON:0001017!8.33e-11!82;UBERON:0003080!2.78e-10!42;UBERON:0005743!3.38e-10!86;UBERON:0002780!4.83e-10!41;UBERON:0001890!4.83e-10!41;UBERON:0006240!4.83e-10!41;UBERON:0000073!6.14e-10!94;UBERON:0001016!6.14e-10!94;UBERON:0002616!2.07e-09!59;UBERON:0000178!1.55e-08!15;UBERON:0000179!1.55e-08!15;UBERON:0000463!1.55e-08!15;UBERON:0002020!4.60e-08!34;UBERON:0003528!4.60e-08!34;UBERON:0002346!5.04e-08!90;UBERON:0000955!7.30e-08!69;UBERON:0006238!7.30e-08!69;UBERON:0001893!8.55e-08!34;UBERON:0002791!1.24e-07!33;UBERON:0002371!1.50e-07!80;UBERON:0003075!1.58e-07!86;UBERON:0007284!1.58e-07!86;UBERON:0001474!1.84e-07!86;UBERON:0001869!3.71e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.59e-08;15!UBERON:0000179;1.59e-08;15!UBERON:0000463;1.59e-08;15!UBERON:0002780;5.58e-08;41!UBERON:0001890;5.58e-08;41!UBERON:0007023;7.46e-08;114!UBERON:0000073;3.96e-07;53!UBERON:0002616;3.96e-07;53!UBERON:0003528;7.09e-07;34!UBERON:0002020;7.09e-07;34!UBERON:0002791;8.93e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.25e-24,114;UBERON:0002390,4.32e-16,98;UBERON:0003061,4.32e-16,98;UBERON:0002193,4.69e-13,108;UBERON:0001049,2.78e-12,56;UBERON:0005068,2.78e-12,56;UBERON:0006241,2.78e-12,56;UBERON:0007135,2.78e-12,56;UBERON:0000073,2.40e-11,53;UBERON:0002616,2.40e-11,53;UBERON:0001017,1.40e-10,81;UBERON:0001016,2.92e-10,89;UBERON:0002780,4.83e-10,41;UBERON:0001890,4.83e-10,41;UBERON:0003080,4.83e-10,41;UBERON:0006240,4.83e-10,41;UBERON:0002371,6.41e-09,76;UBERON:0001474,9.27e-09,82;UBERON:0000178,1.55e-08,15;UBERON:0000179,1.55e-08,15;UBERON:0000463,1.55e-08,15;UBERON:0002346,3.20e-08,86;UBERON:0003528,4.60e-08,34;UBERON:0002020,4.60e-08,34;UBERON:0002405,5.91e-08,93;UBERON:0001893,8.55e-08,34;UBERON:0003075,1.01e-07,82;UBERON:0007284,1.01e-07,82;UBERON:0000955,1.18e-07,68;UBERON:0006238,1.18e-07,68;UBERON:0004765,1.57e-07,90;UBERON:0002791,2.35e-07,32;UBERON:0001869,3.71e-07,32;UBERON:0001434,7.21e-07,100 | |||
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| ||
|short_description=p2@CREB1 | |short_description=p2@CREB1 | ||
}} | }} |
Latest revision as of 19:18, 19 September 2015
Short description: | p2@CREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CREB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000353267, ENST00000445803_5end |
EntrezGene: | CREB1 |
HGNC: | 2345 |
UniProt: | E7EWP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.51e-24 | 136 |
hematopoietic stem cell | 1.16e-23 | 168 |
hematopoietic oligopotent progenitor cell | 1.48e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.48e-21 | 161 |
hematopoietic cell | 2.27e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 6.56e-20 | 120 |
nongranular leukocyte | 5.41e-17 | 115 |
myeloid cell | 7.60e-14 | 108 |
common myeloid progenitor | 7.60e-14 | 108 |
myeloid leukocyte | 2.43e-13 | 72 |
granulocyte monocyte progenitor cell | 1.69e-12 | 67 |
myeloid lineage restricted progenitor cell | 3.60e-12 | 66 |
macrophage dendritic cell progenitor | 1.06e-09 | 61 |
monopoietic cell | 2.70e-09 | 59 |
monocyte | 2.70e-09 | 59 |
monoblast | 2.70e-09 | 59 |
promonocyte | 2.70e-09 | 59 |
classical monocyte | 2.61e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.61e-08 | 42 |
lymphoid lineage restricted progenitor cell | 6.99e-08 | 52 |
defensive cell | 8.45e-08 | 48 |
phagocyte | 8.45e-08 | 48 |
lymphocyte | 9.99e-08 | 53 |
common lymphoid progenitor | 9.99e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.25e-24 | 114 |
hematopoietic system | 4.32e-16 | 98 |
blood island | 4.32e-16 | 98 |
hemolymphoid system | 4.69e-13 | 108 |
neural tube | 2.78e-12 | 56 |
neural rod | 2.78e-12 | 56 |
future spinal cord | 2.78e-12 | 56 |
neural keel | 2.78e-12 | 56 |
regional part of nervous system | 2.40e-11 | 53 |
regional part of brain | 2.40e-11 | 53 |
central nervous system | 1.40e-10 | 81 |
nervous system | 2.92e-10 | 89 |
regional part of forebrain | 4.83e-10 | 41 |
forebrain | 4.83e-10 | 41 |
anterior neural tube | 4.83e-10 | 41 |
future forebrain | 4.83e-10 | 41 |
bone marrow | 6.41e-09 | 76 |
bone element | 9.27e-09 | 82 |
blood | 1.55e-08 | 15 |
haemolymphatic fluid | 1.55e-08 | 15 |
organism substance | 1.55e-08 | 15 |
neurectoderm | 3.20e-08 | 86 |
brain grey matter | 4.60e-08 | 34 |
gray matter | 4.60e-08 | 34 |
immune system | 5.91e-08 | 93 |
telencephalon | 8.55e-08 | 34 |
neural plate | 1.01e-07 | 82 |
presumptive neural plate | 1.01e-07 | 82 |
brain | 1.18e-07 | 68 |
future brain | 1.18e-07 | 68 |
skeletal element | 1.57e-07 | 90 |
regional part of telencephalon | 2.35e-07 | 32 |
cerebral hemisphere | 3.71e-07 | 32 |
skeletal system | 7.21e-07 | 100 |