FFCP PHASE1:Hg19::chr2:208259497..208259500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:208259497..208259500,- | |||
|coexpression_cluster_id=C1614 | |||
|description=CAGE_peak_at_chr2:208259497..208259500,- | |description=CAGE_peak_at_chr2:208259497..208259500,- | ||
|id=chr2:208259497..208259500,- | |id=chr2:208259497..208259500,- | ||
|ontology_enrichment_celltype=CL:0000220!5.68e-14!246;CL:0002321!1.14e-13!248;CL:0000144!1.71e-12!625;CL:0000548!3.85e-12!679;CL:0000004!3.85e-12!679;CL:0000255!3.85e-12!679;CL:0000012!6.96e-12!682;CL:0002371!1.40e-11!591;CL:0002368!5.83e-10!13;CL:0000066!1.05e-09!254;CL:0002076!1.63e-09!43;CL:0000003!1.15e-08!722;CL:0002494!5.07e-08!16;CL:0000063!5.49e-08!578;CL:0000223!5.59e-08!59;CL:0002159!2.44e-07!13 | |ontology_enrichment_celltype=CL:0000220!5.68e-14!246;CL:0002321!1.14e-13!248;CL:0000144!1.71e-12!625;CL:0000548!3.85e-12!679;CL:0000004!3.85e-12!679;CL:0000255!3.85e-12!679;CL:0000012!6.96e-12!682;CL:0002371!1.40e-11!591;CL:0002368!5.83e-10!13;CL:0000066!1.05e-09!254;CL:0002076!1.63e-09!43;CL:0000003!1.15e-08!722;CL:0002494!5.07e-08!16;CL:0000063!5.49e-08!578;CL:0000223!5.59e-08!59;CL:0002159!2.44e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.22e-23;13!CL:0002202;6.81e-16;9!CL:0002632;6.81e-16;9!CL:0002076;4.86e-14;42!CL:0002328;1.23e-13;3!CL:0000244;4.37e-10;4!CL:0000731;4.37e-10;4!CL:0002159;1.09e-09;14!CL:0000317;2.21e-09;2!CL:1000448;2.21e-09;2!CL:0002308;2.21e-09;2!CL:0002140;2.21e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,8.79e-24,13;CL:0002076,6.23e-18,42;CL:0002202,6.09e-16,9;CL:0002632,6.09e-16,9;CL:0000223,9.11e-14,58;CL:0002328,1.21e-13,3;CL:0000244,3.89e-10,4;CL:0000731,3.89e-10,4;CL:0002159,6.67e-10,14;CL:0000317,2.31e-09,2;CL:1000448,2.31e-09,2;CL:0002308,2.31e-09,2;CL:0002140,2.31e-09,2;CL:0000066,1.51e-08,253 | |||
|ontology_enrichment_development_v019=CL:0000223;2.48e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!1.09e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.43e-12;14!DOID:120;7.85e-08;27!DOID:193;3.31e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.72e-12,14;DOID:120,8.40e-08,27;DOID:193,3.53e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.95e-11!84;UBERON:0004535!2.01e-10!110;UBERON:0002049!3.10e-10!79;UBERON:0007798!3.10e-10!79;UBERON:0001637!5.69e-10!42;UBERON:0003509!5.69e-10!42;UBERON:0004572!5.69e-10!42;UBERON:0003914!6.43e-10!118;UBERON:0001009!8.22e-10!113;UBERON:0000055!8.85e-10!69;UBERON:0001981!7.14e-09!60;UBERON:0007500!7.14e-09!60;UBERON:0004537!7.14e-09!60;UBERON:0006965!7.14e-09!60;UBERON:0000119!2.56e-08!312;UBERON:0004573!1.42e-07!33;UBERON:0004571!1.42e-07!33;UBERON:0000483!1.74e-07!309;UBERON:0005910!3.04e-07!6;UBERON:0002118!8.23e-07!5;UBERON:0004532!8.23e-07!5;UBERON:0000365!8.98e-07!5;UBERON:0000486!9.67e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.23e-13;3!UBERON:0002031;1.23e-13;3!UBERON:0002419;2.21e-09;2!UBERON:0007771;2.21e-09;2!UBERON:0003297;2.21e-09;2!UBERON:0001821;2.21e-09;2!UBERON:0003487;2.21e-09;2!UBERON:0001820;2.21e-09;2!UBERON:0007196;2.94e-09;15!UBERON:0001558;2.94e-09;15!UBERON:0000486;1.58e-08;12!UBERON:0002185;2.46e-08;5!UBERON:0000365;3.83e-08;5!UBERON:0005911;4.48e-08;36!UBERON:0002118;2.69e-07;5!UBERON:0000992;5.29e-07;13!UBERON:0005910;7.65e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.21e-13,3;UBERON:0002031,1.21e-13,3;UBERON:0002419,2.31e-09,2;UBERON:0007771,2.31e-09,2;UBERON:0003297,2.31e-09,2;UBERON:0001821,2.31e-09,2;UBERON:0003487,2.31e-09,2;UBERON:0001820,2.31e-09,2;UBERON:0005089,2.31e-09,2;UBERON:0005088,2.31e-09,2;UBERON:0007196,2.75e-09,15;UBERON:0001558,2.75e-09,15;UBERON:0002185,2.44e-08,5;UBERON:0000365,3.49e-08,5;UBERON:0002118,2.04e-07,5;UBERON:0000992,5.64e-07,13;UBERON:0005910,7.08e-07,6 | |||
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| ||
|short_description=p@chr2:208259497..208259500,- | |short_description=p@chr2:208259497..208259500,- | ||
}} | }} |
Latest revision as of 05:28, 29 July 2015
Short description: | p@chr2:208259497..208259500, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:208259497..208259500, - |
Coexpression cluster: | C1614_Fibroblast_Small_Bronchial_Mallassezderived_Tracheal_Sebocyte_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 8.79e-24 | 13 |
endo-epithelial cell | 6.23e-18 | 42 |
epithelial cell of tracheobronchial tree | 6.09e-16 | 9 |
epithelial cell of lower respiratory tract | 6.09e-16 | 9 |
endodermal cell | 9.11e-14 | 58 |
bronchial epithelial cell | 1.21e-13 | 3 |
transitional epithelial cell | 3.89e-10 | 4 |
urothelial cell | 3.89e-10 | 4 |
general ecto-epithelial cell | 6.67e-10 | 14 |
sebum secreting cell | 2.31e-09 | 2 |
epithelial cell of sweat gland | 2.31e-09 | 2 |
epithelial cell of skin gland | 2.31e-09 | 2 |
acinar cell of sebaceous gland | 2.31e-09 | 2 |
epithelial cell | 1.51e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.21e-13 | 3 |
epithelium of bronchus | 1.21e-13 | 3 |
skin gland | 2.31e-09 | 2 |
epidermis gland | 2.31e-09 | 2 |
gland of integumental system | 2.31e-09 | 2 |
sebaceous gland | 2.31e-09 | 2 |
skin sebaceous gland | 2.31e-09 | 2 |
sweat gland | 2.31e-09 | 2 |
sweat gland placode | 2.31e-09 | 2 |
sebaceous gland placode | 2.31e-09 | 2 |
tracheobronchial tree | 2.75e-09 | 15 |
lower respiratory tract | 2.75e-09 | 15 |
bronchus | 2.44e-08 | 5 |
urothelium | 3.49e-08 | 5 |
right ovary | 2.04e-07 | 5 |
female gonad | 5.64e-07 | 13 |
transitional epithelium | 7.08e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.72e-12 | 14 |
female reproductive organ cancer | 8.40e-08 | 27 |
reproductive organ cancer | 3.53e-07 | 29 |