FFCP PHASE1:Hg19::chr18:28807557..28807562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:28807557..28807562,- | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_at_chr18:28807557..28807562,- | |description=CAGE_peak_at_chr18:28807557..28807562,- | ||
|id=chr18:28807557..28807562,- | |id=chr18:28807557..28807562,- | ||
|ontology_enrichment_celltype=CL:0000064!1.20e-10!3;CL:0005012!1.20e-10!3;CL:0000067!1.20e-10!3;CL:0002304!1.20e-10!3;CL:0000306!2.11e-08!4;CL:0002222!2.11e-08!4;CL:0002224!2.11e-08!4 | |ontology_enrichment_celltype=CL:0000064!1.20e-10!3;CL:0005012!1.20e-10!3;CL:0000067!1.20e-10!3;CL:0002304!1.20e-10!3;CL:0000306!2.11e-08!4;CL:0002222!2.11e-08!4;CL:0002224!2.11e-08!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.55e-98;1!UBERON:0005062;6.30e-26;4!UBERON:0007284;6.30e-26;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!8.37e-39!3;UBERON:0009751!8.37e-39!3;UBERON:0000946!8.37e-39!3;UBERON:0002523!8.37e-39!3;UBERON:0005983!8.37e-39!3;UBERON:0002165!8.37e-39!3;UBERON:0002062!8.37e-39!3;UBERON:0007280!8.37e-39!3;UBERON:0002135!7.48e-30!1;UBERON:0002079!9.99e-30!1;UBERON:0002146!1.33e-29!1;UBERON:0005623!1.33e-29!1;UBERON:0000948!1.92e-19!24;UBERON:0005498!1.92e-19!24;UBERON:0004140!1.92e-19!24;UBERON:0009881!1.92e-19!24;UBERON:0004141!1.92e-19!24;UBERON:0003084!1.92e-19!24;UBERON:0007005!1.92e-19!24;UBERON:0004139!1.92e-19!24;UBERON:0004291!1.92e-19!24;UBERON:0007100!2.38e-17!27;UBERON:0002133!1.15e-15!2;UBERON:0002081!1.33e-15!2;UBERON:0000970!2.28e-13!20;UBERON:0002104!9.09e-13!21;UBERON:0000020!1.01e-11!23;UBERON:0001032!2.90e-11!24;UBERON:0004456!2.90e-11!24;UBERON:0007625!3.14e-11!11;UBERON:0004151!7.42e-11!3;UBERON:0001778!1.20e-10!3;UBERON:0001775!1.20e-10!3;UBERON:0002342!3.72e-09!14;UBERON:0005062!3.72e-09!14;UBERON:0001801!4.95e-09!14;UBERON:0010077!2.11e-08!4;UBERON:0005389!2.11e-08!4;UBERON:0000484!2.11e-08!4;UBERON:0002546!2.11e-08!4;UBERON:0000965!2.11e-08!4;UBERON:0001803!2.11e-08!4;UBERON:0003073!2.11e-08!4;UBERON:0005426!2.11e-08!4;UBERON:0000488!2.61e-08!4;UBERON:0003103!4.47e-07!69;UBERON:0000019!6.77e-07!19;UBERON:0000047!6.77e-07!19;UBERON:0004088!6.77e-07!19;UBERON:0003072!6.77e-07!19;UBERON:0003071!6.77e-07!19;UBERON:0004128!6.77e-07!19;UBERON:0004535!9.44e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.55e-98;1!UBERON:0002135;1.55e-98;1!UBERON:0002081;3.52e-50;2!UBERON:0002133;3.52e-50;2!UBERON:0003978;5.04e-34;3!UBERON:0004151;5.04e-34;3!UBERON:0000946;5.04e-34;3!UBERON:0000948;3.41e-19;22!UBERON:0007100;4.64e-17;25!UBERON:0010313;2.87e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,9.37e-99,1;UBERON:0002079,2.55e-98,1;UBERON:0002133,2.74e-50,2;UBERON:0002081,4.52e-50,2;UBERON:0010227,4.52e-50,2;UBERON:0003978,4.27e-34,3;UBERON:0009751,4.27e-34,3;UBERON:0000946,4.27e-34,3;UBERON:0002523,4.27e-34,3;UBERON:0005983,4.27e-34,3;UBERON:0002165,4.27e-34,3;UBERON:0002062,4.27e-34,3;UBERON:0007280,4.27e-34,3;UBERON:0004151,5.96e-34,3;UBERON:0000948,1.03e-17,24;UBERON:0005498,1.03e-17,24;UBERON:0004140,1.03e-17,24;UBERON:0009881,1.03e-17,24;UBERON:0004141,1.03e-17,24;UBERON:0003084,1.03e-17,24;UBERON:0007005,1.03e-17,24;UBERON:0004139,1.03e-17,24;UBERON:0004291,1.03e-17,24;UBERON:0007100,6.71e-16,27;UBERON:0004797,1.65e-15,7;UBERON:0010313,2.73e-11,10;UBERON:0002342,2.73e-11,10;UBERON:0005062,2.73e-11,10;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p@chr18:28807557..28807562,- | |short_description=p@chr18:28807557..28807562,- | ||
}} | }} |
Latest revision as of 00:19, 26 July 2015
Short description: | p@chr18:28807557..28807562, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:28807557..28807562, - |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mitral valve | 9.37e-99 | 1 |
left cardiac atrium | 2.55e-98 | 1 |
atrioventricular valve | 2.74e-50 | 2 |
cardiac atrium | 4.52e-50 | 2 |
future cardiac atrium | 4.52e-50 | 2 |
valve | 4.27e-34 | 3 |
cardiac mesenchyme | 4.27e-34 | 3 |
cardial valve | 4.27e-34 | 3 |
tunica intima | 4.27e-34 | 3 |
heart layer | 4.27e-34 | 3 |
endocardium | 4.27e-34 | 3 |
endocardial cushion | 4.27e-34 | 3 |
presumptive endocardium | 4.27e-34 | 3 |
cardiac chamber | 5.96e-34 | 3 |
heart | 1.03e-17 | 24 |
primitive heart tube | 1.03e-17 | 24 |
primary heart field | 1.03e-17 | 24 |
anterior lateral plate mesoderm | 1.03e-17 | 24 |
heart tube | 1.03e-17 | 24 |
heart primordium | 1.03e-17 | 24 |
cardiac mesoderm | 1.03e-17 | 24 |
cardiogenic plate | 1.03e-17 | 24 |
heart rudiment | 1.03e-17 | 24 |
primary circulatory organ | 6.71e-16 | 27 |
blood vessel layer | 1.65e-15 | 7 |
neural crest-derived structure | 2.73e-11 | 10 |
neural crest | 2.73e-11 | 10 |
neural fold | 2.73e-11 | 10 |
compound organ | 4.47e-07 | 68 |