FFCP PHASE1:Hg19::chr18:21572835..21572856,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125488 | |EntrezGene=125488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |HGNC=26595 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N584 | |UniProt=Q8N584 | ||
|association_with_transcript=98bp_to_ENST00000304621,NM_153211,uc002kuu.2_5end | |association_with_transcript=98bp_to_ENST00000304621,NM_153211,uc002kuu.2_5end | ||
|cluster_id=chr18:21572835..21572856,+ | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_10_at_TTC39C_5end | |description=CAGE_peak_10_at_TTC39C_5end | ||
|id=chr18:21572835..21572856,+ | |id=chr18:21572835..21572856,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.46e-30!18;CL:0000789!2.46e-30!18;CL:0002420!2.46e-30!18;CL:0002419!2.46e-30!18;CL:0000790!2.46e-30!18;CL:0000738!6.32e-23!140;CL:0000084!9.93e-23!25;CL:0000827!9.93e-23!25;CL:0000625!2.26e-21!11;CL:0002087!2.38e-20!119;CL:0000037!6.42e-16!172;CL:0000566!6.42e-16!172;CL:0002031!1.01e-15!124;CL:0002032!2.01e-14!165;CL:0000837!2.01e-14!165;CL:0000988!2.90e-14!182;CL:0000838!6.28e-13!52;CL:0000624!1.08e-12!6;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000766!1.82e-09!76;CL:0000094!2.61e-08!8;CL:0000860!4.39e-08!45;CL:0000898!4.29e-07!3;CL:0002057!6.21e-07!42 | |ontology_enrichment_celltype=CL:0000791!2.46e-30!18;CL:0000789!2.46e-30!18;CL:0002420!2.46e-30!18;CL:0002419!2.46e-30!18;CL:0000790!2.46e-30!18;CL:0000738!6.32e-23!140;CL:0000084!9.93e-23!25;CL:0000827!9.93e-23!25;CL:0000625!2.26e-21!11;CL:0002087!2.38e-20!119;CL:0000037!6.42e-16!172;CL:0000566!6.42e-16!172;CL:0002031!1.01e-15!124;CL:0002032!2.01e-14!165;CL:0000837!2.01e-14!165;CL:0000988!2.90e-14!182;CL:0000838!6.28e-13!52;CL:0000624!1.08e-12!6;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000766!1.82e-09!76;CL:0000094!2.61e-08!8;CL:0000860!4.39e-08!45;CL:0000898!4.29e-07!3;CL:0002057!6.21e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.52e-51;18!CL:0000789;5.52e-51;18!CL:0002419;5.52e-51;18!CL:0000625;4.59e-37;11!CL:0000084;1.05e-35;25!CL:0000624;1.05e-18;6!CL:0000542;1.54e-10;53!CL:0000771;5.93e-10;2!CL:0000898;3.85e-07;3!CL:0000226;7.85e-07;3!CL:0000842;7.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.47e-51,18;CL:0000789,3.47e-51,18;CL:0002420,3.47e-51,18;CL:0002419,3.47e-51,18;CL:0000790,3.47e-51,18;CL:0000625,2.66e-37,11;CL:0000084,7.57e-36,25;CL:0000827,7.57e-36,25;CL:0000838,4.45e-20,52;CL:0000542,1.27e-19,53;CL:0000051,1.27e-19,53;CL:0000624,1.09e-18,6;CL:0000738,1.34e-13,136;CL:0002087,1.18e-12,115;CL:0000771,6.07e-10,2;CL:0000037,6.27e-10,168;CL:0002031,1.90e-09,120;CL:0000988,3.85e-09,177;CL:0002032,1.53e-08,161;CL:0000837,1.53e-08,161;CL:0000898,3.85e-07,3;CL:0000226,8.94e-07,3;CL:0000842,8.94e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.52e-51;18!CL:0000051;1.54e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!4.04e-16!9;UBERON:0001557!5.55e-12!19;UBERON:0002390!4.86e-09!102;UBERON:0003061!4.86e-09!102;UBERON:0002193!4.95e-09!112;UBERON:0000178!4.02e-07!15;UBERON:0000179!4.02e-07!15;UBERON:0000463!4.02e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.06e-15;9!UBERON:0001557;1.06e-15;9!UBERON:0000178;1.80e-09;15!UBERON:0000179;1.80e-09;15!UBERON:0000463;1.80e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.59e-15,9;UBERON:0001557,1.56e-12,19;UBERON:0000178,2.09e-09,15;UBERON:0000179,2.09e-09,15;UBERON:0000463,2.09e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,0.464448369948228,0,0,0,0,0,0,0,1.00272223735071,0.434021741431704,0,0.32389366601898,0,0,0,0,0.697287110717054,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.689491361473237,1.93645405075148,0,0,0.272906150057846,0.224723484445085,0,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0.75374599577023,0,0,0,1.84138817993782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,5.31116379307349,2.35806457649499,3.28962398399215,1.33749196312542,0.651844533267181,4.73447805734733,0,1.6711568532776,21.2116253381883,20.1595844071095,24.6431516026164,1.5370958367081,2.21100890851793,0.328875809207352,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,12.2630557952615,11.3397057009268,11.6389058328971,2.22995790026868,1.30216690771284,5.70271226669025,1.80690142893327,2.55973222308837,6.24653632761729,1.4206635122641,0.821127996921047,5.84659555351724,3.7441627409691,1.44824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65629520055781,0.674338760312407,1.20505514941741,1.21323370005633,0.871517776369625,1.42362371466658,1.07865046528132,1.37355025587742,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94061520403854,1.2937654491571,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16920065307218,0.215714200818617,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0,0.714695326373367,1.23408681925858,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,2.59263438078475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0.709163045303809,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46630900405095,0,0,0,0,0,0,0,0,0.563903507879121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,1.34704106029175,0.645499848534087,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,0.464448369948228,0,0,0,0,0,0,0,1.00272223735071,0.434021741431704,0,0.32389366601898,0,0,0,0,0.697287110717054,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.689491361473237,1.93645405075148,0,0,0.272906150057846,0.224723484445085,0,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0.75374599577023,0,0,0,1.84138817993782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,5.31116379307349,2.35806457649499,3.28962398399215,1.33749196312542,0.651844533267181,4.73447805734733,0,1.6711568532776,21.2116253381883,20.1595844071095,24.6431516026164,1.5370958367081,2.21100890851793,0.328875809207352,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,12.2630557952615,11.3397057009268,11.6389058328971,2.22995790026868,1.30216690771284,5.70271226669025,1.80690142893327,2.55973222308837,6.24653632761729,1.4206635122641,0.821127996921047,5.84659555351724,3.7441627409691,1.44824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65629520055781,0.674338760312407,1.20505514941741,1.21323370005633,0.871517776369625,1.42362371466658,1.07865046528132,1.37355025587742,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94061520403854,1.2937654491571,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16920065307218,0.215714200818617,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0,0.714695326373367,1.23408681925858,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,2.59263438078475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0.709163045303809,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46630900405095,0,0,0,0,0,0,0,0,0.563903507879121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,1.34704106029175,0.645499848534087,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p10@TTC39C | |short_description=p10@TTC39C | ||
}} | }} |
Latest revision as of 00:29, 19 September 2015
Short description: | p10@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TTC39C_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 98bp_to_ENST00000304621, NM_153211, uc002kuu.2_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | Q8N584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.47e-51 | 18 |
alpha-beta T cell | 3.47e-51 | 18 |
immature T cell | 3.47e-51 | 18 |
mature T cell | 3.47e-51 | 18 |
immature alpha-beta T cell | 3.47e-51 | 18 |
CD8-positive, alpha-beta T cell | 2.66e-37 | 11 |
T cell | 7.57e-36 | 25 |
pro-T cell | 7.57e-36 | 25 |
lymphoid lineage restricted progenitor cell | 4.45e-20 | 52 |
lymphocyte | 1.27e-19 | 53 |
common lymphoid progenitor | 1.27e-19 | 53 |
CD4-positive, alpha-beta T cell | 1.09e-18 | 6 |
leukocyte | 1.34e-13 | 136 |
nongranular leukocyte | 1.18e-12 | 115 |
eosinophil | 6.07e-10 | 2 |
hematopoietic stem cell | 6.27e-10 | 168 |
hematopoietic lineage restricted progenitor cell | 1.90e-09 | 120 |
hematopoietic cell | 3.85e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.53e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-08 | 161 |
naive T cell | 3.85e-07 | 3 |
single nucleate cell | 8.94e-07 | 3 |
mononuclear cell | 8.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.59e-15 | 9 |
upper respiratory tract | 1.56e-12 | 19 |
blood | 2.09e-09 | 15 |
haemolymphatic fluid | 2.09e-09 | 15 |
organism substance | 2.09e-09 | 15 |