FFCP PHASE1:Hg19::chr18:12060032..12060044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:12060032..12060044,+ | |||
|description=CAGE_peak_at_chr18:12060032..12060044,+ | |description=CAGE_peak_at_chr18:12060032..12060044,+ | ||
|id=chr18:12060032..12060044,+ | |id=chr18:12060032..12060044,+ | ||
|ontology_enrichment_celltype=CL:0000159!2.05e-08!2 | |ontology_enrichment_celltype=CL:0000159!2.05e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000785;9.98e-16;1!CL:0000819;9.98e-16;1!CL:0000319;2.21e-15;1!CL:0002253;1.61e-08;2!CL:0000159;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.16e-15,1;CL:0000319,1.34e-15,1;CL:0002253,1.61e-08,2;CL:0000785,1.73e-08,2;CL:0000955,1.73e-08,2;CL:0000818,1.73e-08,2;CL:0000954,1.73e-08,2;CL:0000816,1.73e-08,2;CL:0000159,1.86e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000954;1.61e-08;2 | |||
|ontology_enrichment_disease=DOID:299!1.37e-07!25;DOID:0050687!5.17e-07!143 | |ontology_enrichment_disease=DOID:299!1.37e-07!25;DOID:0050687!5.17e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:0060073;9.98e-16;1!DOID:8675;9.98e-16;1!DOID:12603;9.98e-16;1!DOID:3030;2.21e-15;1!DOID:1325;4.04e-09;7!DOID:3904;4.04e-09;7!DOID:3910;2.40e-08;2!DOID:3905;2.77e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,8.63e-16,1;DOID:0060073,1.16e-15,1;DOID:8675,1.16e-15,1;DOID:3030,1.34e-15,1;DOID:1325,4.04e-09,7;DOID:3904,4.04e-09,7;DOID:3910,2.48e-08,2;DOID:3905,2.77e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0002619!2.75e-35!22;UBERON:0001950!5.00e-34!20;UBERON:0000956!9.76e-31!25;UBERON:0000203!9.76e-31!25;UBERON:0001869!9.14e-30!32;UBERON:0001893!8.53e-28!34;UBERON:0002020!1.39e-27!34;UBERON:0003528!1.39e-27!34;UBERON:0002791!2.07e-25!33;UBERON:0001049!5.12e-23!57;UBERON:0005068!5.12e-23!57;UBERON:0006241!5.12e-23!57;UBERON:0007135!5.12e-23!57;UBERON:0002780!2.20e-22!41;UBERON:0001890!2.20e-22!41;UBERON:0006240!2.20e-22!41;UBERON:0003080!9.36e-22!42;UBERON:0002616!6.04e-20!59;UBERON:0007023!6.43e-19!115;UBERON:0000955!7.92e-18!69;UBERON:0006238!7.92e-18!69;UBERON:0001017!2.98e-17!82;UBERON:0002346!3.55e-17!90;UBERON:0000073!4.02e-17!94;UBERON:0001016!4.02e-17!94;UBERON:0005743!3.42e-16!86;UBERON:0001871!2.17e-15!7;UBERON:0003075!7.13e-15!86;UBERON:0007284!7.13e-15!86;UBERON:0000200!1.22e-14!6;UBERON:0003056!1.07e-13!61;UBERON:0001872!1.48e-11!5;UBERON:0000349!2.28e-11!5;UBERON:0002771!2.52e-11!3;UBERON:0000033!9.55e-11!123;UBERON:0000153!5.55e-10!129;UBERON:0007811!5.55e-10!129;UBERON:0000924!6.50e-10!173;UBERON:0006601!6.50e-10!173;UBERON:0004121!1.86e-08!169;UBERON:0001876!3.49e-08!2;UBERON:0000025!7.48e-07!194;UBERON:0002021!9.06e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.95e-15;22!UBERON:0000956;1.68e-13;25!UBERON:0000203;1.68e-13;25!UBERON:0001872;3.35e-12;5!UBERON:0001950;5.41e-11;20!UBERON:0003528;2.42e-09;34!UBERON:0002020;2.42e-09;34!UBERON:0001869;4.84e-09;32!UBERON:0002791;1.94e-08;32!UBERON:0001893;1.94e-08;34!UBERON:0002771;2.40e-08;2!UBERON:0001954;2.40e-08;2!UBERON:0004903;2.40e-08;2!UBERON:0003022;2.40e-08;2!UBERON:0002421;2.40e-08;2!UBERON:0002600;2.40e-08;2!UBERON:0002173;2.40e-08;2!UBERON:0002186;2.40e-08;2!UBERON:0002780;6.27e-07;41!UBERON:0001890;6.27e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.91e-15,22;UBERON:0000956,1.66e-13,25;UBERON:0000203,1.66e-13,25;UBERON:0001872,2.99e-12,5;UBERON:0001950,5.00e-11,20;UBERON:0002791,1.21e-10,32;UBERON:0001869,1.21e-10,32;UBERON:0003528,4.91e-10,34;UBERON:0002020,4.91e-10,34;UBERON:0001893,4.91e-10,34;UBERON:0002771,2.00e-08,2;UBERON:0002780,2.34e-08,41;UBERON:0001890,2.34e-08,41;UBERON:0003080,2.34e-08,41;UBERON:0006240,2.34e-08,41;UBERON:0004903,2.48e-08,2;UBERON:0002173,2.48e-08,2;UBERON:0002186,2.48e-08,2;UBERON:0001954,2.87e-08,2;UBERON:0003022,2.87e-08,2;UBERON:0002421,2.87e-08,2;UBERON:0002600,2.87e-08,2 | |||
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| ||
|short_description=p@chr18:12060032..12060044,+ | |short_description=p@chr18:12060032..12060044,+ | ||
}} | }} |
Latest revision as of 23:39, 25 July 2015
Short description: | p@chr18:12060032..12060044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:12060032..12060044, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.16e-15 | 1 |
mucus secreting cell | 1.34e-15 | 1 |
epithelial cell of large intestine | 1.61e-08 | 2 |
mature B cell | 1.73e-08 | 2 |
pre-B-II cell | 1.73e-08 | 2 |
transitional stage B cell | 1.73e-08 | 2 |
small pre-B-II cell | 1.73e-08 | 2 |
immature B cell | 1.73e-08 | 2 |
seromucus secreting cell | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.91e-15 | 22 |
cerebral cortex | 1.66e-13 | 25 |
pallium | 1.66e-13 | 25 |
parietal lobe | 2.99e-12 | 5 |
neocortex | 5.00e-11 | 20 |
regional part of telencephalon | 1.21e-10 | 32 |
cerebral hemisphere | 1.21e-10 | 32 |
brain grey matter | 4.91e-10 | 34 |
gray matter | 4.91e-10 | 34 |
telencephalon | 4.91e-10 | 34 |
middle temporal gyrus | 2.00e-08 | 2 |
regional part of forebrain | 2.34e-08 | 41 |
forebrain | 2.34e-08 | 41 |
anterior neural tube | 2.34e-08 | 41 |
future forebrain | 2.34e-08 | 41 |
bronchoalveolar duct junction | 2.48e-08 | 2 |
alveolar duct | 2.48e-08 | 2 |
bronchiole | 2.48e-08 | 2 |
Ammon's horn | 2.87e-08 | 2 |
lobe parts of cerebral cortex | 2.87e-08 | 2 |
hippocampal formation | 2.87e-08 | 2 |
limbic lobe | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 8.63e-16 | 1 |
lymphatic system cancer | 1.16e-15 | 1 |
lymphosarcoma | 1.16e-15 | 1 |
mucinous adenocarcinoma | 1.34e-15 | 1 |
bronchus cancer | 4.04e-09 | 7 |
bronchogenic carcinoma | 4.04e-09 | 7 |
lung adenocarcinoma | 2.48e-08 | 2 |
lung carcinoma | 2.77e-07 | 9 |